Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | AMD27_RS14635 | Genome accession | NZ_CP015110 |
| Coordinates | 3060702..3061325 (-) | Length | 207 a.a. |
| NCBI ID | WP_067661864.1 | Uniprot ID | A0A143G6Z4 |
| Organism | Acinetobacter sp. TGL-Y2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3055702..3066325
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMD27_RS14615 (AMD27_14615) | aroK | 3056671..3057213 (-) | 543 | WP_067661857.1 | shikimate kinase AroK | - |
| AMD27_RS14620 (AMD27_14620) | pilQ | 3057250..3059427 (-) | 2178 | WP_067661859.1 | type IV pilus secretin PilQ | Machinery gene |
| AMD27_RS14625 (AMD27_14625) | comL | 3059447..3059941 (-) | 495 | WP_067661861.1 | pilus assembly protein PilP | Machinery gene |
| AMD27_RS14630 (AMD27_14630) | comO | 3059974..3060705 (-) | 732 | WP_067661862.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AMD27_RS14635 (AMD27_14635) | pilN | 3060702..3061325 (-) | 624 | WP_067661864.1 | PilN domain-containing protein | Machinery gene |
| AMD27_RS14640 (AMD27_14640) | comM | 3061325..3062383 (-) | 1059 | WP_067661866.1 | pilus assembly protein PilM | Machinery gene |
| AMD27_RS14645 (AMD27_14645) | ponA | 3062543..3065098 (+) | 2556 | WP_067661867.1 | penicillin-binding protein PBP1a | - |
| AMD27_RS14650 (AMD27_14650) | - | 3065170..3065976 (-) | 807 | WP_067661870.1 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 23209.62 Da Isoelectric Point: 7.9572
>NTDB_id=176724 AMD27_RS14635 WP_067661864.1 3060702..3061325(-) (pilN) [Acinetobacter sp. TGL-Y2]
MAKINLLPWREERREQRKKEFIIICIAVALLAIATVLASWFFLNQKLNDQEQANQLVVSTNQNLDTQLKTLEGLQERRKA
VIDRMKLIQGLEGQRPVTVRLVDELVRVVPASMYITKFSRSGDKFTIEGKAESPNSVADLLRGLEASEWYRNAFMNSFLA
ATENKEKAPSSVIPRVEESYGTFVVTADLGAIALPAQNETNTQGAAQ
MAKINLLPWREERREQRKKEFIIICIAVALLAIATVLASWFFLNQKLNDQEQANQLVVSTNQNLDTQLKTLEGLQERRKA
VIDRMKLIQGLEGQRPVTVRLVDELVRVVPASMYITKFSRSGDKFTIEGKAESPNSVADLLRGLEASEWYRNAFMNSFLA
ATENKEKAPSSVIPRVEESYGTFVVTADLGAIALPAQNETNTQGAAQ
Nucleotide
Download Length: 624 bp
>NTDB_id=176724 AMD27_RS14635 WP_067661864.1 3060702..3061325(-) (pilN) [Acinetobacter sp. TGL-Y2]
ATGGCAAAGATTAACTTACTCCCTTGGCGAGAAGAGCGAAGAGAACAACGAAAAAAAGAATTTATTATAATTTGCATTGC
AGTTGCTTTACTGGCCATTGCAACGGTATTGGCGAGTTGGTTCTTTCTCAATCAAAAACTCAATGATCAAGAGCAAGCCA
ATCAATTGGTGGTCAGTACCAATCAAAATTTGGACACCCAATTAAAGACCTTGGAAGGTTTACAAGAACGTCGTAAAGCG
GTGATTGATCGCATGAAATTGATCCAAGGACTTGAAGGGCAGCGGCCCGTCACTGTACGTTTGGTTGATGAGTTAGTACG
TGTTGTTCCAGCAAGCATGTATATCACCAAGTTTTCTCGTTCAGGTGATAAATTTACCATTGAAGGCAAGGCTGAAAGCC
CGAATTCAGTTGCCGATTTATTGCGTGGTCTAGAAGCATCTGAGTGGTATCGCAATGCATTTATGAATTCCTTCCTTGCA
GCGACTGAAAATAAAGAAAAAGCCCCCTCTTCTGTAATTCCAAGAGTTGAAGAATCATACGGTACGTTTGTGGTGACCGC
AGATTTGGGTGCAATTGCATTACCTGCGCAAAATGAGACCAATACACAAGGGGCTGCGCAATGA
ATGGCAAAGATTAACTTACTCCCTTGGCGAGAAGAGCGAAGAGAACAACGAAAAAAAGAATTTATTATAATTTGCATTGC
AGTTGCTTTACTGGCCATTGCAACGGTATTGGCGAGTTGGTTCTTTCTCAATCAAAAACTCAATGATCAAGAGCAAGCCA
ATCAATTGGTGGTCAGTACCAATCAAAATTTGGACACCCAATTAAAGACCTTGGAAGGTTTACAAGAACGTCGTAAAGCG
GTGATTGATCGCATGAAATTGATCCAAGGACTTGAAGGGCAGCGGCCCGTCACTGTACGTTTGGTTGATGAGTTAGTACG
TGTTGTTCCAGCAAGCATGTATATCACCAAGTTTTCTCGTTCAGGTGATAAATTTACCATTGAAGGCAAGGCTGAAAGCC
CGAATTCAGTTGCCGATTTATTGCGTGGTCTAGAAGCATCTGAGTGGTATCGCAATGCATTTATGAATTCCTTCCTTGCA
GCGACTGAAAATAAAGAAAAAGCCCCCTCTTCTGTAATTCCAAGAGTTGAAGAATCATACGGTACGTTTGTGGTGACCGC
AGATTTGGGTGCAATTGCATTACCTGCGCAAAATGAGACCAATACACAAGGGGCTGCGCAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
70 |
96.618 |
0.676 |
| comN | Acinetobacter baylyi ADP1 |
68.912 |
93.237 |
0.643 |