Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AMD27_RS12130 Genome accession   NZ_CP015110
Coordinates   2549746..2550129 (-) Length   127 a.a.
NCBI ID   WP_067660918.1    Uniprot ID   A0A143G5V5
Organism   Acinetobacter sp. TGL-Y2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2544746..2555129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AMD27_RS12115 (AMD27_12120) - 2546692..2548761 (-) 2070 WP_067660909.1 methyl-accepting chemotaxis protein -
  AMD27_RS12120 (AMD27_12125) - 2548804..2549340 (-) 537 WP_067660912.1 chemotaxis protein CheW -
  AMD27_RS12125 (AMD27_12130) - 2549344..2549712 (-) 369 WP_067660915.1 response regulator -
  AMD27_RS12130 (AMD27_12135) pilG 2549746..2550129 (-) 384 WP_067660918.1 twitching motility response regulator PilG Regulator
  AMD27_RS12135 (AMD27_12140) - 2550456..2551046 (+) 591 WP_150115813.1 hypothetical protein -
  AMD27_RS12140 (AMD27_12145) - 2551078..2552199 (+) 1122 WP_067660924.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14252.33 Da        Isoelectric Point: 4.8836

>NTDB_id=176715 AMD27_RS12130 WP_067660918.1 2549746..2550129(-) (pilG) [Acinetobacter sp. TGL-Y2]
MDDKLQNLKVMVIDDSKTIRRTAETLLQREGFNVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTT

Nucleotide


Download         Length: 384 bp        

>NTDB_id=176715 AMD27_RS12130 WP_067660918.1 2549746..2550129(-) (pilG) [Acinetobacter sp. TGL-Y2]
ATGGACGATAAACTTCAAAATTTGAAAGTCATGGTTATTGATGATTCAAAAACTATTCGTCGTACTGCTGAAACACTCTT
ACAAAGAGAAGGTTTTAATGTCGTCACTGCAGTGGATGGCTTCGAAGCGTTATCTAAAATTGCAGAAGCAAATCCGGATA
TCGTATTTGTGGACATTATGATGCCGCGTCTAGACGGCTATCAAACCTGTGCGCTTATTAAAAATTCTCAAAATTATCAA
AATATTCCAGTCATTATGTTGTCGAGTAAAGATGGATTGTTTGATCAAGCAAAAGGTCGGGTTGTAGGTTCGGATGAATA
TTTAACCAAGCCATTTAGCAAAGATGAGTTATTGAATGCGATTCGCAATCATGTAACCACTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A143G5V5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

93.701

100

0.937
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37

Multiple sequence alignment