Detailed information NTG0176702

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BUN12_RS10725
• Genome accession: NZ_CP018902
• Coordinates: 2059073..2060203 (-)
• Length: 376 a.a.
• NCBI ID: WP_013353308.1
• Uniprot ID: A0A9P1JJI8
• Organism: Bacillus amyloliquefaciens strain HK1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2054073..2065203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BUN12_RS10700 (BUN12_2089)	-	2054288..2054956 (+)	669	WP_013353302.1	potassium channel family protein	-
BUN12_RS10705 (BUN12_2090)	-	2054980..2055825 (-)	846	WP_013353303.1	glucosaminidase domain-containing protein	-
BUN12_RS10710 (BUN12_2091)	hmpA	2055965..2057140 (-)	1176	WP_013353304.1	NO-inducible flavohemoprotein	-
BUN12_RS10715	-	2057357..2057997 (+)	641	Protein_2104	cupin domain-containing protein	-
BUN12_RS10720 (BUN12_2093)	-	2058057..2058380 (-)	324	WP_013353306.1	hypothetical protein	-
BUN12_RS10725 (BUN12_2096)	rapC	2059073..2060203 (-)	1131	WP_013353308.1	tetratricopeptide repeat protein	Regulator
BUN12_RS10730 (BUN12_2097)	-	2060591..2060794 (+)	204	WP_014470862.1	hypothetical protein	-
BUN12_RS10745 (BUN12_2100)	-	2063487..2063882 (-)	396	WP_013353310.1	hypothetical protein	-
BUN12_RS10750 (BUN12_2101)	-	2063872..2064285 (-)	414	WP_013353311.1	hypothetical protein	-
BUN12_RS10755 (BUN12_2102)	-	2064471..2064695 (+)	225	WP_014470866.1	helix-turn-helix domain-containing protein	-
BUN12_RS10760 (BUN12_2103)	-	2064818..2065120 (+)	303	WP_014470867.1	hypothetical protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44372.86 Da
• Isoelectric Point: 6.5099

>NTDB_id=176702 BUN12_RS10725 WP_013353308.1 2059073..2060203(-) (rapC) [Bacillus amyloliquefaciens strain HK1]
MSPVLPSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEINEMEEDEYLLIYYSLMKFRHQLMLDYLEPVTVRVRPTIDE
LLEKIEASNKGISGLLCYYSLFFRGMYEFDQKQYVKAIGFYREAEKQLIHVHDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYDQYELYKVRKIQCLFVISGNYVDFKRYEKSLPHLEKALELSKQVNNNERLLSSAYYNIGKNYGDLEEYSKAE
IYLKKAAEISEKYKLGNLPHSLFTYAKLLFKQGKTSEAIQISKKGLSSAIYQGDKLFESLQKYLEALYINAIDQMGIKKT
IDYLEKNKNYSYVEDIALDTAAVYAESKQYDKSYIYHQKMIQTQKQIQRGECLYEF

Nucleotide

• Length: 1131 bp

>NTDB_id=176702 BUN12_RS10725 WP_013353308.1 2059073..2060203(-) (rapC) [Bacillus amyloliquefaciens strain HK1]
GTGAGTCCTGTTTTACCATCATCGGAGGTTGGCGTTAAGATTAATGAATGGTACAAAATGATACGTCAGTTCAGTGTTCC
GGATGCGGAGATTTTGAAAGCGGAAGTGGAACAAGAGATAAACGAGATGGAAGAAGACGAGTATTTACTAATATATTATT
CTCTCATGAAATTCCGCCATCAACTCATGCTTGATTATTTAGAGCCGGTAACTGTCAGAGTCCGACCGACAATCGACGAG
TTGCTGGAAAAAATCGAAGCATCAAATAAAGGCATTTCCGGCCTGCTGTGCTATTATTCTTTATTTTTTCGCGGCATGTA
TGAATTTGATCAGAAGCAGTATGTAAAGGCGATCGGCTTTTATAGAGAGGCTGAAAAACAACTCATTCATGTGCATGATG
AAATTGAGAGAGCGGAGTTTCATTTTAAACTGGCTGAAGCATATTACGGTATGAAACAAAGCCACGTCTCCATGCATCAC
GTAAAGCAAGCGCTCGATATTTACGATCAGTATGAGTTGTATAAAGTCCGGAAAATTCAATGTCTGTTCGTCATATCTGG
GAATTATGTTGACTTTAAACGTTATGAAAAAAGTTTGCCGCATTTAGAAAAAGCTTTAGAGTTGTCGAAACAAGTAAACA
ATAATGAAAGGCTGCTCAGTTCTGCTTATTACAACATAGGAAAGAATTACGGAGACTTAGAAGAATACAGTAAAGCTGAA
ATCTACTTAAAAAAAGCAGCGGAGATTTCTGAAAAGTATAAATTGGGCAACCTTCCGCATTCCTTGTTTACATACGCAAA
GCTTCTATTTAAACAAGGGAAAACAAGCGAGGCGATTCAAATCAGCAAAAAAGGACTTTCATCAGCTATATATCAAGGGG
ATAAGCTGTTTGAATCTCTGCAAAAATATTTGGAGGCTTTATACATTAACGCAATAGACCAAATGGGAATCAAAAAAACA
ATTGATTACCTTGAGAAAAATAAAAACTATTCGTATGTAGAAGATATTGCTCTTGATACGGCTGCTGTTTATGCAGAGTC
AAAGCAATATGACAAATCATATATTTATCATCAAAAAATGATTCAAACGCAAAAACAAATTCAGAGGGGAGAATGCCTGT
ATGAATTTTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (193-252)

3D structure

• AlphaFold DB: A0A9P1JJI8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.591	100	0.449
rapF	Bacillus subtilis subsp. subtilis str. 168	40.633	100	0.41