Detailed information NTG0176694

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: AMD27_RS00985
• Genome accession: NZ_CP015110
• Coordinates: 227714..229147 (-)
• Length: 477 a.a.
• NCBI ID: WP_067655129.1
• Uniprot ID: -
• Organism: Acinetobacter sp. TGL-Y2
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 222714..234147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMD27_RS00970 (AMD27_00970)	lptG	223686..224756 (+)	1071	WP_067655118.1	LPS export ABC transporter permease LptG	-
AMD27_RS00975 (AMD27_00975)	gpmI	224892..226445 (+)	1554	WP_067655122.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
AMD27_RS00980 (AMD27_00980)	-	226469..227650 (+)	1182	WP_067655125.1	S41 family peptidase	-
AMD27_RS00985 (AMD27_00985)	pilR	227714..229147 (-)	1434	WP_067655129.1	sigma-54-dependent transcriptional regulator	Regulator
AMD27_RS00990 (AMD27_00990)	pilS	229172..230737 (-)	1566	WP_067655135.1	sensor histidine kinase	Regulator
AMD27_RS00995 (AMD27_00995)	-	230756..231391 (-)	636	WP_067655138.1	response regulator	-
AMD27_RS01000 (AMD27_01000)	-	231612..232667 (+)	1056	WP_150115737.1	serine hydrolase	-
AMD27_RS01005 (AMD27_01005)	-	232696..233643 (-)	948	WP_067656902.1	IS30 family transposase	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 53658.75 Da
• Isoelectric Point: 6.6063

>NTDB_id=176694 AMD27_RS00985 WP_067655129.1 227714..229147(-) (pilR) [Acinetobacter sp. TGL-Y2]
MAKQQPLVLLVDDEVDLCMLMQMTLSRMGIKTHMAHHLKQAKYFFSEYKYDACITDFNLPDGNGLELVKHVTQHYPKTPI
AVLTAYANMDIAISVLKAGAFDFVSKPINQQHLHQLLQKALHVPVLDLDSDELPLEERLLMGESVQIQQLRESIKKIARS
QAPVFITGESGTGKEVVANLLHQLSNRQDGPFIAINCGAISEDLLESELFGHVKGCFSGATEDKQGLIQAADGGSLFLDE
IAELSLAMQAKLLRSVQEKKIRPLGSDKEIEVDFRIISASHQNLESRVQQGQFRQDLFFRIHVMDLRIAPLRERQQDILI
LARHFIDLICAEWRISTKTLTPQAAQFLMAQHYSGNVRELRNLIERAITLSDADSIEVQHLQPSNTRNLEKASITASPPK
SPTSSISPLAQNALSPAYPQALPEEGLEQYLEKVEKEVLINALNLTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEE

Nucleotide

• Length: 1434 bp

>NTDB_id=176694 AMD27_RS00985 WP_067655129.1 227714..229147(-) (pilR) [Acinetobacter sp. TGL-Y2]
ATGGCTAAACAACAACCACTGGTTTTACTGGTCGATGACGAAGTAGATTTATGTATGCTGATGCAAATGACCTTGTCACG
CATGGGTATTAAAACCCATATGGCACATCACTTAAAACAGGCCAAATACTTTTTTAGCGAATATAAATATGATGCCTGTA
TTACTGACTTTAACTTGCCCGATGGTAATGGTTTAGAGTTGGTGAAACACGTCACACAGCATTATCCAAAGACGCCCATT
GCCGTGCTCACCGCTTATGCCAATATGGACATTGCGATTTCCGTCCTCAAAGCGGGCGCATTTGATTTCGTCAGCAAACC
GATTAACCAACAGCACTTGCATCAGCTTTTGCAAAAAGCCTTGCATGTACCGGTACTGGATCTAGATTCAGATGAGCTAC
CTTTAGAGGAGCGTCTGTTAATGGGTGAGTCGGTTCAAATTCAACAGTTACGCGAGTCAATCAAAAAAATTGCGCGCTCG
CAAGCCCCTGTGTTTATTACGGGTGAATCGGGCACAGGTAAAGAAGTCGTGGCAAATTTGTTGCATCAACTGAGTAACCG
TCAAGATGGACCCTTTATCGCGATTAATTGCGGTGCAATTTCTGAAGACCTGCTTGAAAGTGAATTGTTTGGGCATGTGA
AAGGCTGTTTTTCTGGTGCAACGGAAGACAAACAAGGGCTGATTCAAGCGGCAGATGGGGGTAGTTTATTTTTAGATGAA
ATTGCTGAGCTTTCTCTTGCCATGCAAGCCAAACTACTCCGTTCAGTTCAAGAAAAGAAGATTCGACCACTGGGCAGTGA
TAAAGAAATTGAAGTGGATTTTCGGATTATCAGTGCCAGTCATCAAAATTTAGAGTCGCGAGTTCAGCAAGGTCAATTTA
GACAGGATCTTTTTTTCCGTATCCATGTCATGGATTTGAGGATTGCACCACTGCGTGAACGTCAGCAGGATATTCTCATT
TTGGCCCGACATTTTATCGATTTGATCTGCGCCGAATGGCGTATTTCAACCAAAACGTTGACTCCCCAAGCAGCGCAATT
TTTAATGGCGCAGCATTACTCTGGCAATGTCCGTGAACTGAGGAATCTGATTGAGCGTGCCATTACCTTGAGTGATGCAG
ACAGCATTGAGGTTCAGCATTTACAGCCTTCAAATACGCGTAACCTTGAAAAAGCATCCATTACAGCAAGCCCGCCGAAA
AGCCCCACCAGTTCCATATCTCCGCTTGCGCAAAATGCTTTAAGCCCTGCATATCCTCAAGCTTTGCCTGAAGAGGGACT
TGAGCAGTATTTGGAAAAGGTTGAAAAAGAAGTGTTGATTAATGCCTTGAATTTAACCCACTGGAACAGAACATTGGCGG
CGAAAAAGCTCGGCATGACCTTTCGTTCATTACGTTATCGTTTAAAAAAATTTGGACTCGATACGGAAGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (431-471)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (8-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	68.697	99.79	0.686
pilR	Pseudomonas aeruginosa PAK	45.57	99.371	0.453