Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   A4G16_RS10735 Genome accession   NZ_CP015030
Coordinates   2234689..2235867 (+) Length   392 a.a.
NCBI ID   WP_165889844.1    Uniprot ID   A0A6G8JLE7
Organism   Mannheimia granulomatis strain B 234/94     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2229689..2240867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4G16_RS10705 (A4G16_10555) - 2230286..2231002 (+) 717 WP_165889838.1 arginine ABC transporter substrate-binding protein -
  A4G16_RS10710 (A4G16_10560) - 2231195..2232301 (+) 1107 WP_165889839.1 transglutaminase-like domain-containing protein -
  A4G16_RS10715 (A4G16_10565) - 2232276..2232632 (+) 357 WP_165889840.1 mercuric transporter MerT family protein -
  A4G16_RS10720 (A4G16_10570) - 2232646..2232951 (+) 306 WP_165889841.1 heavy-metal-associated domain-containing protein -
  A4G16_RS10725 (A4G16_10575) - 2233080..2234015 (+) 936 WP_165889842.1 KpsF/GutQ family sugar-phosphate isomerase -
  A4G16_RS10730 (A4G16_10580) def 2234087..2234599 (-) 513 WP_165889843.1 peptide deformylase -
  A4G16_RS10735 (A4G16_10585) dprA 2234689..2235867 (+) 1179 WP_165889844.1 DNA-processing protein DprA Machinery gene
  A4G16_RS10740 (A4G16_10590) secE 2235990..2236403 (+) 414 WP_165889845.1 preprotein translocase subunit SecE -
  A4G16_RS10745 (A4G16_10595) nusG 2236405..2236968 (+) 564 WP_165889846.1 transcription termination/antitermination protein NusG -
  A4G16_RS10750 (A4G16_10600) rplK 2237193..2237621 (+) 429 WP_006248758.1 50S ribosomal protein L11 -
  A4G16_RS10755 (A4G16_10605) rplA 2237626..2238315 (+) 690 WP_165889847.1 50S ribosomal protein L1 -
  A4G16_RS10760 (A4G16_10610) rplJ 2238604..2239095 (+) 492 WP_025235143.1 50S ribosomal protein L10 -
  A4G16_RS10765 (A4G16_10615) rplL 2239151..2239516 (+) 366 WP_027073308.1 50S ribosomal protein L7/L12 -
  A4G16_RS10770 (A4G16_10620) fic 2239614..2240840 (+) 1227 WP_269467720.1 protein adenylyltransferase Fic -

Sequence

Protein


Download         Length: 392 a.a.        Molecular weight: 43716.21 Da        Isoelectric Point: 6.7507

>NTDB_id=176313 A4G16_RS10735 WP_165889844.1 2234689..2235867(+) (dprA) [Mannheimia granulomatis strain B 234/94]
MAYQYDLLRLLQVPQIGPQRIGRLLSEIDFKQFCAYDKHQLRQIGWNEKQIQRWFQPDLNWIEQAFTWAQQPNQHIITLF
DEEYPFLLRQISTAPPVLFVKGWVESLSLPQIAIVGSRDYSPYGEYWAAKFATDLTQNHLVVTSGLAIGIDGFAHKQVVA
EKGKTIAVLGSGLNQIYPARHKNLADQMIDLGGALVSEFSPNQPPLAENFPRRNRIISGLSIGTLVVEATVNSGSLITAR
YALEQGREVFAIPNAIQNPYAQGCHKLIKEGALLVESVADILDAIAYQRQPQQVALFEDEKFKAVQAVKKTENFAKTPSP
CQQSEKQTKSVKNLPNLTACQQQIYQQLSLEPIPVDNLAKTLQIPVEALLVELLGLELSGVIKQVSGGYVIG

Nucleotide


Download         Length: 1179 bp        

>NTDB_id=176313 A4G16_RS10735 WP_165889844.1 2234689..2235867(+) (dprA) [Mannheimia granulomatis strain B 234/94]
ATGGCATATCAGTATGATTTATTACGCTTATTGCAAGTTCCGCAGATTGGGCCGCAACGAATTGGCAGGTTATTGTCAGA
GATCGATTTTAAGCAGTTTTGTGCTTATGATAAACATCAGCTTCGGCAAATCGGTTGGAATGAAAAGCAGATTCAGCGCT
GGTTTCAGCCGGATCTAAATTGGATTGAGCAAGCATTTACTTGGGCTCAGCAGCCGAATCAGCATATTATTACGCTATTT
GATGAGGAATATCCTTTTTTATTACGGCAAATTTCAACTGCTCCCCCCGTGTTATTTGTAAAAGGATGGGTGGAAAGTTT
ATCGCTACCACAAATTGCGATTGTCGGCAGTCGAGATTATTCCCCTTATGGGGAATATTGGGCAGCTAAATTTGCGACTG
ATTTAACCCAGAATCATCTTGTGGTGACAAGCGGTTTAGCAATAGGCATTGATGGTTTTGCTCATAAGCAAGTGGTAGCA
GAAAAGGGCAAGACTATTGCGGTTTTGGGAAGTGGATTAAATCAAATTTACCCGGCTCGTCATAAAAACTTAGCTGATCA
GATGATAGATTTAGGTGGAGCATTAGTTTCGGAGTTTTCGCCGAATCAGCCGCCATTGGCAGAAAATTTCCCTCGTCGTA
ATCGGATTATCAGCGGTTTATCTATAGGGACGCTAGTGGTTGAAGCAACGGTAAATAGTGGCTCACTTATTACTGCTCGG
TATGCGTTAGAGCAAGGTAGAGAGGTTTTTGCTATTCCAAATGCGATTCAAAATCCATATGCACAAGGCTGTCATAAATT
AATTAAAGAGGGTGCTTTGTTAGTAGAATCTGTAGCGGATATTTTGGATGCAATAGCTTATCAACGACAACCACAGCAAG
TTGCATTGTTTGAAGATGAAAAGTTTAAGGCGGTACAAGCGGTCAAAAAAACAGAAAATTTTGCAAAAACACCCTCGCCT
TGCCAACAGTCTGAAAAGCAAACAAAATCAGTAAAAAATTTGCCAAATTTAACCGCTTGCCAGCAGCAGATTTATCAACA
GCTGAGCTTAGAACCAATTCCTGTGGATAATTTAGCTAAAACACTGCAAATTCCCGTTGAAGCACTATTAGTAGAATTGT
TAGGACTAGAATTAAGCGGGGTGATTAAACAGGTAAGTGGGGGGTATGTGATTGGTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(70-276)

DprA winged helix domain (DprA_WH)

(333-388)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8JLE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Glaesserella parasuis strain SC1401

67.176

100

0.673
  dprA Haemophilus influenzae Rd KW20

48.876

90.816

0.444
  dprA Vibrio campbellii strain DS40M4

45.312

97.959

0.444
  dprA Vibrio cholerae strain A1552

41.432

99.745

0.413

Multiple sequence alignment