Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | A4G17_RS01420 | Genome accession | NZ_CP015029 |
| Coordinates | 298656..299000 (+) | Length | 114 a.a. |
| NCBI ID | WP_123956896.1 | Uniprot ID | A0AAE7C225 |
| Organism | Frederiksenia canicola strain HPA 21 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 293656..304000
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4G17_RS01395 (A4G17_01380) | - | 294357..294923 (-) | 567 | WP_123956891.1 | hypothetical protein | - |
| A4G17_RS01400 (A4G17_01385) | waaF | 294913..295965 (-) | 1053 | WP_123956892.1 | lipopolysaccharide heptosyltransferase II | - |
| A4G17_RS01405 (A4G17_01390) | - | 295969..296370 (-) | 402 | WP_123956893.1 | MliC family protein | - |
| A4G17_RS01410 (A4G17_01395) | - | 296437..297117 (-) | 681 | WP_123956894.1 | hypothetical protein | - |
| A4G17_RS01415 (A4G17_01400) | - | 297134..298423 (-) | 1290 | WP_123956895.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| A4G17_RS01420 (A4G17_01405) | comEA/comE1 | 298656..299000 (+) | 345 | WP_123956896.1 | ComEA family DNA-binding protein | Machinery gene |
| A4G17_RS01425 (A4G17_01410) | asd | 299158..300045 (+) | 888 | WP_123956897.1 | archaetidylserine decarboxylase | - |
| A4G17_RS01430 (A4G17_01415) | - | 300121..300681 (+) | 561 | WP_123956898.1 | DUF1287 domain-containing protein | - |
| A4G17_RS01435 (A4G17_01420) | - | 300694..301233 (+) | 540 | WP_123956899.1 | DsbE family thiol:disulfide interchange protein | - |
| A4G17_RS01440 (A4G17_01425) | - | 301233..301691 (+) | 459 | WP_123956900.1 | cytochrome c-type biogenesis protein | - |
| A4G17_RS01445 (A4G17_01430) | ccmI | 301688..302605 (+) | 918 | WP_123956901.1 | c-type cytochrome biogenesis protein CcmI | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12486.54 Da Isoelectric Point: 10.1659
>NTDB_id=176271 A4G17_RS01420 WP_123956896.1 298656..299000(+) (comEA/comE1) [Frederiksenia canicola strain HPA 21]
MKKITQLALTLLLGVFTTQSFAKEKAQVPTAEPPPMQQQTEAKKVALNPNLVNINTASAAEIQDKLVGIGAKKAQAILEY
REKNGKFLNIEQLTEVSGIGKATLEKNRDRIVLE
MKKITQLALTLLLGVFTTQSFAKEKAQVPTAEPPPMQQQTEAKKVALNPNLVNINTASAAEIQDKLVGIGAKKAQAILEY
REKNGKFLNIEQLTEVSGIGKATLEKNRDRIVLE
Nucleotide
Download Length: 345 bp
>NTDB_id=176271 A4G17_RS01420 WP_123956896.1 298656..299000(+) (comEA/comE1) [Frederiksenia canicola strain HPA 21]
ATGAAGAAAATCACACAACTGGCTTTAACACTGCTGCTCGGTGTATTTACCACCCAATCTTTTGCCAAAGAAAAAGCCCA
AGTTCCAACCGCTGAACCGCCTCCAATGCAACAACAGACAGAAGCCAAAAAGGTAGCACTCAATCCGAATTTAGTGAATA
TCAACACGGCTTCTGCGGCAGAGATCCAAGATAAACTGGTCGGAATTGGGGCAAAGAAAGCTCAAGCAATCCTTGAATAT
CGTGAGAAAAACGGCAAATTTCTCAATATTGAGCAATTGACCGAGGTCTCAGGTATCGGTAAAGCAACGCTTGAGAAAAA
CCGCGATCGCATCGTTTTAGAATAA
ATGAAGAAAATCACACAACTGGCTTTAACACTGCTGCTCGGTGTATTTACCACCCAATCTTTTGCCAAAGAAAAAGCCCA
AGTTCCAACCGCTGAACCGCCTCCAATGCAACAACAGACAGAAGCCAAAAAGGTAGCACTCAATCCGAATTTAGTGAATA
TCAACACGGCTTCTGCGGCAGAGATCCAAGATAAACTGGTCGGAATTGGGGCAAAGAAAGCTCAAGCAATCCTTGAATAT
CGTGAGAAAAACGGCAAATTTCTCAATATTGAGCAATTGACCGAGGTCTCAGGTATCGGTAAAGCAACGCTTGAGAAAAA
CCGCGATCGCATCGTTTTAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
65.789 |
100 |
0.658 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.83 |
92.982 |
0.491 |
| comEA | Vibrio campbellii strain DS40M4 |
39.815 |
94.737 |
0.377 |