Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   A2I97_RS14835 Genome accession   NZ_CP014990
Coordinates   3000834..3001766 (-) Length   310 a.a.
NCBI ID   WP_025650217.1    Uniprot ID   -
Organism   Bacillus velezensis strain KD1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2995834..3006766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2I97_RS14800 (A2I97_14310) - 2996090..2996566 (+) 477 WP_070082285.1 Na+/H+ antiporter subunit E -
  A2I97_RS14805 (A2I97_14315) - 2996566..2996850 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  A2I97_RS14810 (A2I97_14320) mnhG 2996834..2997208 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  A2I97_RS14815 (A2I97_14325) - 2997248..2997631 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  A2I97_RS14820 (A2I97_14330) comA 2997653..2998297 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  A2I97_RS14825 (A2I97_14335) comP 2998378..3000681 (-) 2304 WP_070082286.1 sensor histidine kinase Regulator
  A2I97_RS14835 (A2I97_14345) comQ 3000834..3001766 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  A2I97_RS14840 (A2I97_14350) degQ 3001951..3002091 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  A2I97_RS14850 (A2I97_14355) - 3002557..3002898 (+) 342 WP_014305721.1 hypothetical protein -
  A2I97_RS14855 (A2I97_14360) - 3002905..3004125 (-) 1221 WP_070082287.1 EAL and HDOD domain-containing protein -
  A2I97_RS14860 (A2I97_14365) - 3004255..3005721 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  A2I97_RS14865 (A2I97_14370) - 3005739..3006290 (-) 552 WP_070082288.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 310 a.a.        Molecular weight: 35663.80 Da        Isoelectric Point: 5.4532

>NTDB_id=175798 A2I97_RS14835 WP_025650217.1 3000834..3001766(-) (comQ) [Bacillus velezensis strain KD1]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide


Download         Length: 933 bp        

>NTDB_id=175798 A2I97_RS14835 WP_025650217.1 3000834..3001766(-) (comQ) [Bacillus velezensis strain KD1]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(41-227)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

93.226

0.571


Multiple sequence alignment