Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   A2I97_RS14820 Genome accession   NZ_CP014990
Coordinates   2997653..2998297 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain KD1     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2992653..3003297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2I97_RS14785 (A2I97_14295) - 2993838..2994269 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  A2I97_RS14790 (A2I97_14300) - 2994269..2994610 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  A2I97_RS14795 (A2I97_14305) - 2994603..2996084 (+) 1482 WP_070082284.1 Na+/H+ antiporter subunit D -
  A2I97_RS14800 (A2I97_14310) - 2996090..2996566 (+) 477 WP_070082285.1 Na+/H+ antiporter subunit E -
  A2I97_RS14805 (A2I97_14315) - 2996566..2996850 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  A2I97_RS14810 (A2I97_14320) mnhG 2996834..2997208 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  A2I97_RS14815 (A2I97_14325) - 2997248..2997631 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  A2I97_RS14820 (A2I97_14330) comA 2997653..2998297 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  A2I97_RS14825 (A2I97_14335) comP 2998378..3000681 (-) 2304 WP_070082286.1 sensor histidine kinase Regulator
  A2I97_RS14835 (A2I97_14345) comQ 3000834..3001766 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  A2I97_RS14840 (A2I97_14350) degQ 3001951..3002091 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  A2I97_RS14850 (A2I97_14355) - 3002557..3002898 (+) 342 WP_014305721.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=175796 A2I97_RS14820 WP_003152052.1 2997653..2998297(-) (comA) [Bacillus velezensis strain KD1]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=175796 A2I97_RS14820 WP_003152052.1 2997653..2998297(-) (comA) [Bacillus velezensis strain KD1]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTTAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGCAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACTCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAATAAGCTGAATGTCGGCTCCCGTACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864

Multiple sequence alignment