Detailed information NTG0174454

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: A2G56_RS01620
• Genome accession: NZ_CP014835
• Coordinates: 363716..364945 (+)
• Length: 409 a.a.
• NCBI ID: WP_062708093.1
• Uniprot ID: -
• Organism: Streptococcus halotolerans strain HTS9
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 358716..369945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A2G56_RS01600	-	359472..360746 (-)	1275	WP_062708081.1	hydroxymethylglutaryl-CoA reductase, degradative	-
A2G56_RS01605	-	360739..361914 (-)	1176	WP_062708084.1	hydroxymethylglutaryl-CoA synthase	-
A2G56_RS01610	-	362111..362950 (+)	840	WP_062708087.1	thymidylate synthase	-
A2G56_RS01615	-	363023..363526 (+)	504	WP_062708090.1	dihydrofolate reductase	-
A2G56_RS01620	clpX	363716..364945 (+)	1230	WP_062708093.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
A2G56_RS01625	yihA	364954..365553 (+)	600	WP_062708096.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
A2G56_RS01630	-	365561..366205 (+)	645	WP_062708100.1	deoxynucleoside kinase	-
A2G56_RS01635	-	366690..367109 (+)	420	WP_062708102.1	Rrf2 family transcriptional regulator	-
A2G56_RS01640	-	367204..368211 (+)	1008	WP_062708105.1	NADP-dependent oxidoreductase	-
A2G56_RS01645	-	368221..369057 (+)	837	WP_062708108.1	alpha/beta fold hydrolase	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45038.61 Da
• Isoelectric Point: 4.4824

>NTDB_id=174454 A2G56_RS01620 WP_062708093.1 363716..364945(+) (clpX) [Streptococcus halotolerans strain HTS9]
MVGNRTNDTMVYCSFCGKNQDEVKKIIAGNGVFICDECVALSQEIIKEELAEEVLADLTEVPKPKELLAILNQYVVGQDR
AKRALAVAVYNHYKRISFTESRDEEDVVLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPSQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSKKVSDDSSYMQEIIAEDIQKFGLIPEFIGRLPVTAALEQLTVNDLILI
LTEPKNALVRQYETLLSYDNVELAFDREALEAIAAKAIERKTGARGLRSIIEETMMDIMFEVPSQEDVKRVRITKDAVDG
TGQPILETA

Nucleotide

• Length: 1230 bp

>NTDB_id=174454 A2G56_RS01620 WP_062708093.1 363716..364945(+) (clpX) [Streptococcus halotolerans strain HTS9]
ATGGTTGGAAATCGAACGAATGATACAATGGTTTATTGCTCTTTTTGTGGCAAAAACCAAGATGAAGTCAAAAAAATCAT
TGCCGGAAATGGTGTCTTCATCTGTGATGAATGTGTTGCTTTATCACAAGAAATTATAAAAGAAGAGTTAGCTGAAGAAG
TTTTAGCTGATTTGACAGAAGTTCCAAAGCCAAAAGAATTGTTGGCTATTTTAAACCAATACGTTGTTGGTCAGGATCGA
GCTAAACGTGCCTTGGCAGTAGCAGTCTACAATCACTACAAACGGATTAGTTTTACAGAGAGTCGTGATGAGGAAGATGT
CGTTCTTCAAAAATCGAACATTCTAATGATTGGTCCAACAGGTTCGGGAAAAACATTCTTAGCCCAAACCTTGGCTAAAA
GTCTCAACGTCCCATTTGCCATTGCTGATGCGACATCCTTGACAGAAGCTGGTTATGTGGGAGAAGACGTTGAGAATATC
CTGTTGAAACTGATCCAAGCAGCCGACTACAATGTAGAACGAGCTGAACGTGGCATTATCTACGTCGATGAAATTGATAA
AATTGCCAAAAAAGGTGAGAATGTTTCCATTACACGCGATGTTTCGGGTGAAGGGGTACAACAAGCACTTCTCAAAATTA
TCGAGGGAACGGTTGCCAGTGTGCCGCCACAAGGGGGACGTAAACACCCAAGTCAAGAAATGATTCAAATTGACACGAAG
AACATTCTGTTTATTGTTGGTGGTGCTTTTGATGGTATCGAAGAGATTGTTAAACAGCGTCTCGGCGAAAAGATCATTGG
ATTTGGTCAAAATAGTAAGAAAGTTTCAGATGATTCGTCTTACATGCAAGAAATCATTGCCGAAGATATTCAAAAATTTG
GTCTTATTCCGGAGTTCATTGGTCGCTTGCCTGTCACAGCAGCGCTTGAACAGTTGACGGTTAATGACTTGATTCTCATT
TTGACAGAACCTAAAAATGCGCTTGTTCGCCAATATGAAACCCTGTTATCATATGACAACGTCGAATTAGCATTTGATCG
TGAAGCCTTAGAAGCCATTGCTGCTAAAGCTATTGAACGTAAAACAGGTGCGCGCGGCTTACGTTCCATCATTGAAGAGA
CCATGATGGACATCATGTTTGAAGTTCCAAGCCAAGAAGATGTCAAGCGTGTTCGGATTACCAAAGATGCAGTAGATGGT
ACAGGTCAACCGATTTTAGAAACGGCTTAG

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	89.487	100	0.895
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.608	98.044	0.555