Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   A2G56_RS00600 Genome accession   NZ_CP014835
Coordinates   138827..139828 (+) Length   333 a.a.
NCBI ID   WP_062707584.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 133827..144828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS00580 - 134490..134882 (-) 393 WP_062707574.1 VOC family protein -
  A2G56_RS00585 - 134985..135653 (-) 669 WP_062707576.1 NAD(P)H-dependent oxidoreductase -
  A2G56_RS00590 - 135780..137315 (+) 1536 WP_062707579.1 ClC family H(+)/Cl(-) exchange transporter -
  A2G56_RS00595 - 137547..138632 (-) 1086 WP_062707581.1 M24 family metallopeptidase -
  A2G56_RS00600 ccpA 138827..139828 (+) 1002 WP_062707584.1 catabolite control protein A Regulator
  A2G56_RS00605 - 139919..141376 (+) 1458 WP_062707587.1 alpha-amylase -
  A2G56_RS00610 - 141610..142608 (+) 999 WP_062707591.1 glycosyltransferase family 4 protein -
  A2G56_RS00615 - 142610..143962 (+) 1353 WP_062707594.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36799.86 Da        Isoelectric Point: 5.3132

>NTDB_id=174452 A2G56_RS00600 WP_062707584.1 138827..139828(+) (ccpA) [Streptococcus halotolerans strain HTS9]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRQKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNISNAYFA
LLAKGIDDIAEMYKYNIVLASSDEDEDKEVNVVNTLFAKQVDGIIFMGHRLTDKIRAEFSRSRTPVVLAGTIDLEHQLPS
VNIDYEKAVEGVVSDLAKHHKKIAFVSGPLLDDINGKVRLAGYKAGLQSHQLDYTEGLVFEAKYRYEDGFELAERVINSG
ATAAYVGEDELAVGLLNGLFAAGKRVPEDFEIITSNDSEIVKYTRPNLSSINQPIYDLGAVAMRMLTKIMNKEELEEKEI
ILNHGVTKRASTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=174452 A2G56_RS00600 WP_062707584.1 138827..139828(+) (ccpA) [Streptococcus halotolerans strain HTS9]
ATGAATACAGATGATACTATTACCATTTATGATGTCGCCAGAGAAGCAGGTGTATCAATGGCAACCGTTAGTCGTGTTGT
CAATGGTAACAAAAATGTGAAAGAAAATACCCGTCAAAAGGTCCTAGAGGTTATCGATCGTTTAGACTACCGTCCTAATG
CCGTAGCGCGTGGTCTTGCTAGCAAGAAAACGACGACAGTTGGAGTTGTTATTCCTAATATTTCTAATGCCTACTTTGCC
CTTTTGGCTAAAGGTATCGATGATATCGCTGAAATGTACAAATACAACATTGTATTGGCTTCGAGTGATGAAGATGAAGA
TAAGGAAGTCAACGTGGTTAACACGCTATTTGCTAAGCAAGTTGACGGGATTATCTTCATGGGGCACCGGTTGACTGATA
AGATTCGTGCTGAGTTTTCACGCTCACGCACTCCAGTCGTTCTTGCGGGAACAATTGATTTAGAGCATCAATTGCCAAGT
GTTAATATTGATTACGAAAAAGCGGTTGAAGGTGTTGTTTCAGACCTAGCCAAACACCACAAAAAGATTGCATTCGTTTC
AGGCCCTCTTCTTGATGACATCAATGGAAAAGTACGCCTTGCTGGCTATAAAGCTGGTTTACAATCGCATCAGCTTGACT
ATACAGAAGGTCTTGTTTTTGAAGCCAAATACCGTTATGAAGATGGTTTTGAACTAGCAGAACGTGTGATTAACTCAGGT
GCAACAGCTGCCTATGTTGGCGAAGACGAACTTGCTGTTGGTCTTTTGAACGGTCTCTTTGCTGCTGGCAAACGTGTCCC
AGAAGATTTCGAAATTATTACAAGTAATGATTCCGAAATTGTGAAATACACACGACCAAACTTGTCATCTATCAACCAGC
CAATTTATGATTTAGGTGCGGTTGCTATGCGTATGTTGACTAAAATCATGAACAAAGAAGAATTAGAAGAAAAAGAAATT
ATTCTTAATCATGGTGTTACTAAGCGTGCATCTACAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781
  ccpA Streptococcus pneumoniae D39

75.976

100

0.76
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.798

99.399

0.565

Multiple sequence alignment