Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   A1140_RS07295 Genome accession   NZ_CP014834
Coordinates   1502219..1502848 (-) Length   209 a.a.
NCBI ID   WP_103207605.1    Uniprot ID   A0A2K3ZIJ2
Organism   Staphylococcus felis strain BN1     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1497219..1507848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1140_RS07265 (A1140_07125) - 1497588..1498829 (-) 1242 WP_103207614.1 aminopeptidase -
  A1140_RS07270 (A1140_07130) - 1498846..1499031 (-) 186 WP_103207656.1 DUF1128 family protein -
  A1140_RS07275 (A1140_07135) - 1499190..1499654 (+) 465 WP_103207612.1 low molecular weight protein-tyrosine-phosphatase -
  A1140_RS07280 (A1140_07140) - 1499656..1499943 (+) 288 WP_103207611.1 YtxH domain-containing protein -
  A1140_RS07285 (A1140_07145) - 1500306..1501529 (+) 1224 WP_103207609.1 YihY/virulence factor BrkB family protein -
  A1140_RS07290 (A1140_07150) - 1501560..1502132 (+) 573 WP_103207607.1 carbonic anhydrase -
  A1140_RS07295 (A1140_07155) vraR 1502219..1502848 (-) 630 WP_103207605.1 response regulator transcription factor Regulator
  A1140_RS07300 (A1140_07160) vraS 1502838..1503881 (-) 1044 WP_103207603.1 sensor histidine kinase Regulator
  A1140_RS07305 (A1140_07165) liaF 1503878..1504579 (-) 702 WP_103207601.1 cell wall-active antibiotics response protein LiaF -
  A1140_RS07310 (A1140_07170) - 1504592..1504981 (-) 390 WP_349420707.1 hypothetical protein -
  A1140_RS07315 (A1140_07175) map 1505076..1505837 (-) 762 WP_115856682.1 type I methionyl aminopeptidase -
  A1140_RS07320 (A1140_07180) - 1505928..1506932 (+) 1005 WP_181894655.1 aromatic acid exporter family protein -
  A1140_RS07325 (A1140_07185) - 1507012..1507737 (-) 726 WP_115871432.1 type 1 glutamine amidotransferase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23518.22 Da        Isoelectric Point: 4.8838

>NTDB_id=174443 A1140_RS07295 WP_103207605.1 1502219..1502848(-) (vraR) [Staphylococcus felis strain BN1]
MTIRVLFVDDHEMVRIGISSYLSTQPDIEVVGEGESGKDAIEKAKLLKPDLILMDLVMTDMDGVEATTYIKKEMPQIKVV
MLTSYIEDKEVYRALDAGVDSYILKTTSASDIASAIRKTSQGESVFEAEVLVKMRNRMKQRAELYELLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHGLIE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=174443 A1140_RS07295 WP_103207605.1 1502219..1502848(-) (vraR) [Staphylococcus felis strain BN1]
ATGACAATTAGAGTATTATTTGTAGATGATCATGAAATGGTTCGTATTGGGATATCAAGTTACTTATCAACTCAACCTGA
TATAGAAGTAGTTGGTGAAGGGGAGTCGGGCAAAGATGCTATCGAAAAAGCAAAACTGTTAAAGCCTGATTTGATCTTAA
TGGATTTAGTGATGACTGACATGGATGGTGTCGAGGCAACGACTTATATTAAAAAGGAAATGCCGCAGATTAAAGTAGTC
ATGCTAACAAGCTATATAGAAGATAAAGAGGTGTATCGCGCGCTTGATGCGGGTGTTGATAGTTATATCCTAAAAACGAC
AAGTGCAAGTGACATTGCGTCAGCTATTCGTAAAACGAGTCAAGGTGAATCTGTTTTTGAAGCGGAAGTCCTTGTTAAAA
TGAGAAATCGTATGAAACAAAGAGCTGAATTGTATGAATTGTTAACTGAAAGAGAAATGGAAATATTATTATTAATTGCC
AAGGGATATTCTAATCAGGAGATAGCAAGTGCATCACATATTACCATAAAGACCGTTAAAACACATGTTAGTAATATATT
GAGTAAGTTGGAAGTACAAGATCGTACTCAAGCAGTCATTTACGCATTTCAGCACGGATTAATCGAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K3ZIJ2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

88.995

100

0.89
  degU Bacillus subtilis subsp. subtilis str. 168

34.375

100

0.368

Multiple sequence alignment