Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   A1140_RS07300 Genome accession   NZ_CP014834
Coordinates   1502838..1503881 (-) Length   347 a.a.
NCBI ID   WP_103207603.1    Uniprot ID   A0A2K3ZIM8
Organism   Staphylococcus felis strain BN1     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1497838..1508881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A1140_RS07270 (A1140_07130) - 1498846..1499031 (-) 186 WP_103207656.1 DUF1128 family protein -
  A1140_RS07275 (A1140_07135) - 1499190..1499654 (+) 465 WP_103207612.1 low molecular weight protein-tyrosine-phosphatase -
  A1140_RS07280 (A1140_07140) - 1499656..1499943 (+) 288 WP_103207611.1 YtxH domain-containing protein -
  A1140_RS07285 (A1140_07145) - 1500306..1501529 (+) 1224 WP_103207609.1 YihY/virulence factor BrkB family protein -
  A1140_RS07290 (A1140_07150) - 1501560..1502132 (+) 573 WP_103207607.1 carbonic anhydrase -
  A1140_RS07295 (A1140_07155) vraR 1502219..1502848 (-) 630 WP_103207605.1 response regulator transcription factor Regulator
  A1140_RS07300 (A1140_07160) vraS 1502838..1503881 (-) 1044 WP_103207603.1 sensor histidine kinase Regulator
  A1140_RS07305 (A1140_07165) liaF 1503878..1504579 (-) 702 WP_103207601.1 cell wall-active antibiotics response protein LiaF -
  A1140_RS07310 (A1140_07170) - 1504592..1504981 (-) 390 WP_349420707.1 hypothetical protein -
  A1140_RS07315 (A1140_07175) map 1505076..1505837 (-) 762 WP_115856682.1 type I methionyl aminopeptidase -
  A1140_RS07320 (A1140_07180) - 1505928..1506932 (+) 1005 WP_181894655.1 aromatic acid exporter family protein -
  A1140_RS07325 (A1140_07185) - 1507012..1507737 (-) 726 WP_115871432.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40184.49 Da        Isoelectric Point: 5.1680

>NTDB_id=174444 A1140_RS07300 WP_103207603.1 1502838..1503881(-) (vraS) [Staphylococcus felis strain BN1]
MNHYVRTIGSMLILVYSMFTAFFFIDKVFVNIIFFQGMFYTQIFGIPVFLFLNLIVIFLCIIVGSVIAYKINQQNDWLQQ
QIERAFEGETVGVNDQQLELYNETLEIYRSLVPLNQELHKMRIKTQNLTNESYNLNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETNLNPPLDQQIPTLEKMIQDSQLEMRALLLHLRPIGLKDKSLGEGIRSLVTELQKKVPMKVIQEI
DEFDVPKGIEDHLFRITQEAISNTLRHAKGEQVTVELLKREDYLLLRIQDDGIGFNVDDKIEQSYGLKNMRERAIEIGAT
FHIVSLPDAGTRIEVKAPLEKEESHDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=174444 A1140_RS07300 WP_103207603.1 1502838..1503881(-) (vraS) [Staphylococcus felis strain BN1]
ATGAATCACTATGTCAGAACGATTGGGTCAATGCTCATACTAGTTTACAGTATGTTTACAGCTTTCTTTTTTATCGATAA
AGTTTTTGTGAATATCATATTTTTTCAAGGTATGTTTTACACTCAAATCTTCGGTATTCCTGTATTTTTATTTCTTAACT
TAATTGTCATTTTTTTGTGTATTATTGTGGGTAGTGTAATAGCGTATAAGATTAATCAACAAAATGATTGGTTACAACAA
CAGATTGAGCGTGCATTTGAAGGTGAAACAGTCGGTGTTAACGATCAGCAACTAGAGCTGTATAATGAAACATTAGAGAT
TTACCGTTCATTAGTACCGCTCAATCAAGAATTACATAAAATGCGAATTAAAACTCAAAATTTGACAAATGAATCTTACA
ACTTAAATGATATAAAAGTAAAAAAAATAATTGAAGATGAACGTCAACGGTTAGCTAGAGAGCTTCACGATAGTGTTTCG
CAGCAATTGTTTGCAGCTAGTATGATGTTATCAGCTATTAAAGAAACAAACTTAAATCCACCACTTGATCAACAGATACC
AACACTTGAAAAAATGATTCAAGACTCACAACTTGAAATGAGAGCATTATTATTACACTTACGTCCAATAGGTTTGAAGG
ATAAATCATTAGGTGAAGGCATACGATCGTTAGTGACTGAATTACAAAAGAAAGTACCTATGAAAGTTATACAAGAAATT
GATGAGTTTGATGTTCCAAAGGGTATAGAAGATCACTTATTTAGAATCACACAAGAGGCAATCTCCAATACGTTACGTCA
TGCTAAGGGTGAACAAGTGACGGTTGAATTGTTAAAAAGAGAAGACTATTTATTATTGCGTATTCAAGATGATGGTATCG
GCTTTAATGTGGACGATAAAATTGAACAAAGTTATGGTTTGAAAAATATGCGTGAAAGAGCAATTGAAATTGGTGCAACT
TTTCATATCGTCTCTTTGCCTGATGCAGGAACACGTATCGAGGTTAAAGCACCATTAGAAAAGGAGGAAAGTCATGACAA
TTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2K3ZIM8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

82.997

100

0.83


Multiple sequence alignment