Detailed information NTG0174029

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: A0T30_RS14360
• Genome accession: NZ_CP014784
• Coordinates: 3130273..3132498 (-)
• Length: 741 a.a.
• NCBI ID: WP_061904707.1
• Uniprot ID: -
• Organism: Aquipseudomonas alcaligenes strain NEB 585
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3125273..3137498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0T30_RS14325 (A0T30_14325)	murB	3125633..3126652 (-)	1020	WP_061904704.1	UDP-N-acetylmuramate dehydrogenase	-
A0T30_RS14330 (A0T30_14330)	-	3126649..3127113 (-)	465	WP_061904705.1	low molecular weight protein-tyrosine-phosphatase	-
A0T30_RS14335 (A0T30_14335)	kdsB	3127113..3127877 (-)	765	WP_021700484.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
A0T30_RS14340 (A0T30_14340)	-	3127878..3128063 (-)	186	WP_021700485.1	Trm112 family protein	-
A0T30_RS14345 (A0T30_14345)	lpxK	3128103..3129107 (-)	1005	WP_061904706.1	tetraacyldisaccharide 4'-kinase	-
A0T30_RS14350 (A0T30_14350)	-	3129104..3129532 (-)	429	WP_021700487.1	biopolymer transporter ExbD	-
A0T30_RS14355 (A0T30_14355)	-	3129529..3130200 (-)	672	WP_021700488.1	MotA/TolQ/ExbB proton channel family protein	-
A0T30_RS14360 (A0T30_14360)	comA	3130273..3132498 (-)	2226	WP_061904707.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
A0T30_RS14365 (A0T30_14365)	-	3132594..3133121 (+)	528	WP_061904708.1	DUF2062 domain-containing protein	-
A0T30_RS14370 (A0T30_14370)	-	3133156..3134400 (-)	1245	WP_061904709.1	lipoprotein-releasing ABC transporter permease subunit	-
A0T30_RS14375 (A0T30_14375)	lolD	3134400..3135083 (-)	684	WP_061904710.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
A0T30_RS14380 (A0T30_14380)	-	3135076..3136326 (-)	1251	WP_061904711.1	lipoprotein-releasing ABC transporter permease subunit	-
A0T30_RS14385 (A0T30_14385)	-	3136425..3136997 (+)	573	WP_021700494.1	PilZ domain-containing protein	-
A0T30_RS14390 (A0T30_14390)	-	3136994..3137296 (+)	303	WP_061904712.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80701.10 Da
• Isoelectric Point: 10.0330

>NTDB_id=174029 A0T30_RS14360 WP_061904707.1 3130273..3132498(-) (comA) [Aquipseudomonas alcaligenes strain NEB 585]
MRTGMFALAAGLACLPLLPQLPPTWLLLALLPLALMLLPWRSYPLALLLFGFVWACFSAQAALDDRLAMALDGRTLWLEG
RVSGLPEVGEGVVRFQLEDAAAREQRLPQRLRLSWYDGPPVRAGERWRLAVKLKRPRGLVNPQGFDYEAWLLAQRIGATG
TIKAGERLQAASGTAAWRDALRQELLAVEAFGRAGALAALVLGDDSGLSRTDWRVLQDTGTVHLLVISGQHVALLAALLY
ALVAGLARLGLWPRFLPWLPWACTLAFVGALGYGLLAGFEVPVRRACVMVALVLLWRLRFRHLGLWWPLLLAFVLVLLIE
PLASLQAGFWLSFGAVAVLAWVFGGRLGAWSWWRVWWRAQWTLALGLLPLFFALGLPLSLSGPLANLLAVPWVSLLVVPL
ALLGTLLLPVPWLGEGLLWLAGGLLAILFQLLGWIASALPAWLPTAVPLWCWLLGSLGVLLCLLPAGVPLRALGLVLLLA
LLLPPRERIPAGQAQVWQLDVGQGLAVLVRTREHALLYDAGPRFGDFDLGERVVLPSLRQLGVDRLDLLLLSHADSDHAG
GAEAVIRGMTVARVTSGEAAELPRALQAQSCVDGARWAWDGVVFTTWRWRDAPPGNAASCLLKVEAQGESLLLTGDVDAA
AEKALLASGRDLRARWLQVPHHGSRSSSSAAFLDAVAPHGALLSRGWHNPFGHPYPGVVARYHARGIALYDSAELGAIRL
QLGAVRGISAWRERPRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=174029 A0T30_RS14360 WP_061904707.1 3130273..3132498(-) (comA) [Aquipseudomonas alcaligenes strain NEB 585]
ATGCGCACAGGGATGTTCGCGCTGGCCGCAGGCCTGGCCTGTTTGCCGTTGCTGCCGCAATTGCCGCCGACCTGGCTGTT
GCTGGCGCTGTTGCCGCTGGCGCTGATGCTGCTGCCCTGGCGCAGTTATCCGCTGGCCTTGTTGCTGTTCGGCTTCGTCT
GGGCCTGCTTCAGCGCGCAGGCAGCACTGGATGACCGCCTGGCCATGGCGCTCGACGGCCGTACCCTGTGGCTCGAGGGG
CGGGTCAGCGGGTTGCCGGAGGTGGGCGAGGGCGTGGTGCGTTTCCAGCTGGAAGATGCAGCGGCGCGTGAGCAGCGGCT
GCCACAGCGATTGCGCCTGTCCTGGTATGACGGCCCGCCGGTGCGGGCCGGCGAGCGCTGGCGCCTGGCAGTCAAGCTCA
AGCGCCCGCGCGGCCTGGTCAACCCGCAGGGCTTTGACTACGAAGCCTGGCTGCTGGCTCAGCGCATCGGCGCCACGGGC
ACGATCAAGGCTGGCGAGCGCCTGCAGGCGGCGTCAGGCACGGCCGCCTGGCGCGATGCGCTGCGCCAGGAGCTGCTGGC
GGTCGAGGCGTTCGGTCGCGCGGGAGCGCTGGCGGCACTGGTGCTGGGTGACGACTCCGGGCTCAGTCGCACCGACTGGC
GCGTGCTGCAGGACACCGGCACGGTGCATCTACTGGTGATCTCCGGGCAGCATGTGGCGCTGCTGGCGGCGCTGCTCTAT
GCGCTGGTCGCCGGCCTGGCGCGGCTCGGCCTGTGGCCTCGATTTCTACCATGGTTGCCCTGGGCCTGCACTCTGGCCTT
CGTCGGCGCACTGGGCTACGGCTTGCTGGCCGGCTTCGAGGTGCCGGTGCGGCGGGCCTGTGTGATGGTGGCCCTGGTGT
TGCTGTGGCGTTTGCGTTTTCGTCATCTGGGCCTTTGGTGGCCTTTGCTGCTGGCGTTCGTGTTGGTGCTGCTGATCGAG
CCGCTGGCCAGCCTGCAGGCAGGCTTCTGGCTATCGTTCGGCGCGGTGGCGGTGCTGGCCTGGGTGTTTGGCGGGCGGCT
CGGCGCCTGGTCCTGGTGGCGCGTGTGGTGGCGTGCGCAGTGGACCCTAGCGCTGGGGCTGTTGCCGCTGTTCTTCGCGC
TGGGGTTGCCGCTGAGCCTGAGCGGGCCGCTGGCCAATCTGCTGGCCGTACCCTGGGTCAGTCTGCTGGTGGTGCCGCTG
GCGCTGCTCGGAACCCTGTTGCTGCCCGTGCCATGGCTGGGTGAGGGCCTGCTGTGGCTGGCGGGTGGCCTGCTGGCGAT
CCTGTTCCAGCTGCTGGGCTGGATAGCCAGCGCGCTGCCGGCCTGGTTGCCCACCGCCGTGCCACTCTGGTGCTGGCTGC
TCGGCAGCCTCGGTGTGTTGCTCTGCCTGCTGCCGGCGGGCGTGCCGCTGCGCGCGTTGGGGCTGGTGCTGTTGCTCGCC
CTGTTGCTACCGCCGCGCGAGCGCATTCCGGCGGGGCAGGCGCAGGTCTGGCAACTGGATGTCGGTCAGGGTCTGGCTGT
GCTGGTGCGTACTCGCGAGCACGCGTTGCTGTACGACGCCGGTCCGCGCTTCGGCGACTTCGACCTGGGCGAGCGGGTGG
TGCTGCCCTCGTTGCGCCAGCTGGGTGTCGACCGACTCGACCTGCTGCTGCTCAGCCATGCCGATAGCGATCATGCCGGC
GGTGCCGAGGCGGTGATCCGGGGCATGACCGTAGCGCGGGTGACAAGTGGCGAGGCTGCCGAGCTGCCGCGGGCGCTGCA
GGCGCAATCCTGCGTCGACGGTGCACGCTGGGCGTGGGATGGCGTGGTTTTCACCACCTGGCGTTGGCGTGATGCGCCGC
CGGGTAATGCCGCGTCCTGCCTGCTCAAGGTAGAGGCGCAGGGCGAGAGTCTACTGCTCACCGGCGATGTGGATGCTGCA
GCGGAGAAGGCCCTGCTGGCGAGCGGTCGCGATCTGCGCGCGCGCTGGCTGCAGGTGCCGCATCACGGCAGTCGTAGCTC
CTCCAGCGCCGCCTTTCTCGACGCCGTGGCGCCGCACGGCGCGCTGCTTTCGCGCGGTTGGCACAACCCGTTCGGCCATC
CGTACCCCGGCGTCGTTGCGCGCTATCACGCGCGCGGCATCGCCCTGTATGACAGCGCCGAGTTGGGCGCCATTCGGCTG
CAGCTGGGGGCTGTGCGGGGGATTTCCGCCTGGCGCGAACGCCCGCGCTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-684)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Competence protein (Competence) (200-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	68.112	96.491	0.657
comA	Ralstonia pseudosolanacearum GMI1000	38.254	100	0.402