Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB684_RS17100 Genome accession   NZ_CP014781
Coordinates   3305884..3308205 (-) Length   773 a.a.
NCBI ID   WP_026080865.1    Uniprot ID   A0AAP9USS4
Organism   Bacillus licheniformis strain HRBL-15TDI7     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3300884..3313205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB684_RS17060 (AB684_17060) - 3301346..3301777 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  AB684_RS17065 (AB684_17065) - 3301777..3302118 (+) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  AB684_RS17070 (AB684_17070) - 3302111..3303589 (+) 1479 WP_003184838.1 Na+/H+ antiporter subunit D -
  AB684_RS17075 (AB684_17075) - 3303595..3304071 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  AB684_RS17080 (AB684_17080) - 3304071..3304355 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  AB684_RS17085 (AB684_17085) mnhG 3304339..3304713 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  AB684_RS17090 (AB684_17090) - 3304753..3305142 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  AB684_RS17095 (AB684_17095) comA 3305159..3305797 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  AB684_RS17100 (AB684_17100) comP 3305884..3308205 (-) 2322 WP_026080865.1 ATP-binding protein Regulator
  AB684_RS17105 (AB684_17105) comX 3308245..3308409 (-) 165 WP_011198251.1 competence pheromone ComX -
  AB684_RS17110 (AB684_17110) - 3308424..3309293 (-) 870 WP_011198252.1 polyprenyl synthetase family protein -
  AB684_RS17115 (AB684_17115) degQ 3309482..3309622 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  AB684_RS17125 (AB684_17125) - 3310141..3310455 (+) 315 WP_231105283.1 SDR family oxidoreductase -
  AB684_RS17130 (AB684_17130) - 3310498..3311718 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 773 a.a.        Molecular weight: 88433.46 Da        Isoelectric Point: 6.3438

>NTDB_id=173895 AB684_RS17100 WP_026080865.1 3305884..3308205(-) (comP) [Bacillus licheniformis strain HRBL-15TDI7]
MRVNYNKLSLIIILLSLSLVPYIIYVNLHSSYLGMTMQFNEKNEYQVFEIEKGSLAQSLGFKKGDVILEINGKSVEKLRA
DDGKLADELSDVKSMIVERDGEIGFVETGYELVSYESLFLFIIPMMFYLLSLFCVYFIIKSNKRLNSASAFILIVFLLVT
STAYSCSVGSAKGDSLSIYITMITFQFVPVLYLHYIYQYFKEKGKEFFNNKIFLFLYPVGLLNLLLEISGDNLQISYSSI
KLFNLVSFLVVTIIAFALIIYGVIKNKASEQAYFLRILVITNFVAFIPFLIFYVIPYVFIGDYIFPAMFVVPFLLIIPFS
LVYQFIATKIYDIEFLLGRFKYYGLLAILPSLTAVGVFTLTQELSNSLNTVKNTIFIYFIMLGVFYLKEILDFRFRLKRF
SEKFNYQDSVFKFTQLIRSSTSLAQVLRELSQTILDVLPVSQAYVLELKSDGTVGLLENNANDQVWKPYEKEAFRAITDI
GKIVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWL
NKLMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSAVIQTTRETCQELRPQL
LYDLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHY
EDDGIGVDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2322 bp        

>NTDB_id=173895 AB684_RS17100 WP_026080865.1 3305884..3308205(-) (comP) [Bacillus licheniformis strain HRBL-15TDI7]
ATGCGTGTTAATTATAATAAACTATCTTTAATTATTATTTTGCTAAGCCTCTCCTTGGTTCCTTATATTATCTATGTAAA
TCTGCATTCTAGTTACCTTGGAATGACAATGCAATTTAATGAAAAAAACGAATACCAAGTATTCGAGATTGAAAAAGGGT
CACTGGCTCAATCCCTAGGATTTAAAAAAGGGGATGTTATTCTAGAGATAAATGGTAAAAGTGTAGAAAAATTAAGGGCT
GATGATGGGAAATTAGCTGATGAATTAAGTGATGTTAAATCGATGATCGTTGAAAGAGATGGAGAGATAGGGTTTGTAGA
GACCGGATATGAATTGGTGAGTTATGAAAGTCTATTTCTATTTATTATTCCAATGATGTTTTATCTCCTTTCTCTTTTTT
GTGTTTATTTCATAATAAAATCAAACAAAAGATTAAATTCGGCTTCAGCTTTTATTTTAATTGTTTTTCTGCTTGTTACA
TCAACAGCTTATTCTTGTTCTGTGGGATCTGCAAAGGGAGATAGTTTAAGTATCTATATAACAATGATAACTTTTCAATT
CGTTCCTGTTTTGTATCTCCACTATATTTATCAATATTTCAAGGAAAAAGGAAAAGAGTTTTTCAATAATAAAATATTTC
TTTTCCTATACCCTGTGGGTTTATTGAATTTGCTATTGGAAATTTCCGGTGATAATTTGCAGATTTCTTATAGTTCCATT
AAGCTCTTTAACCTGGTATCTTTCTTGGTTGTTACCATTATAGCCTTTGCTCTTATCATTTATGGTGTAATAAAAAATAA
AGCTTCTGAGCAAGCCTATTTTTTAAGGATACTTGTTATCACAAATTTTGTTGCGTTTATTCCGTTCTTAATTTTCTATG
TCATTCCATATGTATTTATCGGTGATTATATATTCCCGGCAATGTTTGTTGTACCCTTTTTGTTGATTATTCCTTTCTCA
TTAGTGTATCAATTTATTGCTACCAAAATATATGACATTGAATTCTTATTGGGACGTTTTAAATACTATGGATTGTTAGC
CATTTTACCAAGCTTGACAGCTGTAGGTGTATTTACTTTAACACAAGAATTAAGTAATAGTCTAAATACAGTTAAAAACA
CTATATTTATCTATTTTATTATGCTAGGTGTTTTTTATCTCAAAGAAATTCTTGATTTTCGTTTCCGTTTAAAAAGGTTT
TCTGAAAAATTTAATTACCAAGATAGTGTATTTAAGTTTACCCAACTTATACGGAGCTCGACATCGTTAGCGCAAGTGCT
AAGGGAATTGTCTCAAACGATTCTTGATGTTTTACCTGTCAGCCAGGCTTATGTACTGGAGTTAAAGAGTGATGGAACCG
TAGGGTTACTTGAAAATAATGCAAACGATCAAGTTTGGAAGCCTTATGAAAAAGAAGCTTTTAGGGCTATCACCGACATC
GGCAAAATCGTCGAAGTCGACCGTGGGTTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTT
GTCGGTTTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCC
TGGAAAACGTGCTGAAAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTG
AATAAATTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATAT
GATTTCCTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAA
GGCTCATCAATATGAATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAGGAGCTGAGGCCGCAGCTG
TTGTACGATCTCGGACTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCG
CCTCAATACGGAAAGGTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAA
GCAATGCGGTTAAACATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTAT
GAAGATGACGGCATTGGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCG
CGTCCGCGCACTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.202

99.871

0.521


Multiple sequence alignment