Detailed information NTG0173512

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A0W69_RS06925
• Genome accession: NZ_CP014742
• Coordinates: 1286837..1287796 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain WP2202
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1281837..1292796

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0W69_RS06900 (A0W69_06900)	neuC	1282401..1283516 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
A0W69_RS10200 (A0W69_06905)	-	1283513..1284427 (+)	915	Protein_1322	beta-1,4-N-acetylgalactosaminyltransferase	-
A0W69_RS10205 (A0W69_06910)	-	1284461..1285123 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
A0W69_RS06915 (A0W69_06915)	-	1285118..1285970 (-)	853	Protein_1324	glycosyltransferase	-
A0W69_RS06920 (A0W69_06920)	waaV	1285954..1286778 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
A0W69_RS06925 (A0W69_06925)	waaF	1286837..1287796 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
A0W69_RS06930 (A0W69_06930)	gmhA	1287777..1288337 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
A0W69_RS06935 (A0W69_06935)	rfaE1	1288334..1289719 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
A0W69_RS06940 (A0W69_06940)	rfaD	1289712..1290665 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
A0W69_RS06945 (A0W69_06945)	gmhB	1290666..1291226 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
A0W69_RS06950 (A0W69_06950)	-	1291308..1291610 (+)	303	WP_002852762.1	cytochrome c	-
A0W69_RS06955 (A0W69_06955)	ccoS	1291633..1291839 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=173512 A0W69_RS06925 WP_002875425.1 1286837..1287796(+) (waaF) [Campylobacter jejuni strain WP2202]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=173512 A0W69_RS06925 WP_002875425.1 1286837..1287796(+) (waaF) [Campylobacter jejuni strain WP2202]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1