Detailed information NTG0173394

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BSR08_RS10275
• Genome accession: NZ_CP018184
• Coordinates: 1872036..1872641 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain KH2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1867036..1877641

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR08_RS10245 (BSR08_10410)	-	1867849..1868238 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
BSR08_RS10250 (BSR08_10415)	yajC	1868295..1868561 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
BSR08_RS10255 (BSR08_10420)	tgt	1868598..1869743 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
BSR08_RS10260 (BSR08_10425)	queA	1869770..1870798 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BSR08_RS10265 (BSR08_10430)	yrzS	1870828..1871028 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
BSR08_RS10270 (BSR08_10435)	ruvB	1871021..1872025 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BSR08_RS10275 (BSR08_10440)	ruvA	1872036..1872641 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
BSR08_RS10280 (BSR08_10445)	bofC	1872780..1873292 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
BSR08_RS10285 (BSR08_10450)	csbX	1873340..1874647 (-)	1308	WP_014480439.1	MFS transporter	-
BSR08_RS10290 (BSR08_10455)	iolG	1874718..1875743 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
BSR08_RS10295 (BSR08_10460)	yrzF	1875981..1876628 (+)	648	WP_014480441.1	phosphotransferase	-
BSR08_RS22845 (BSR08_10465)	-	1876674..1876796 (-)	123	WP_003229707.1	hypothetical protein	-
BSR08_RS23410	-	1876881..1876955 (+)	75	Protein_2043	hypothetical protein	-
BSR08_RS22850 (BSR08_10470)	-	1876959..1877327 (+)	369	WP_186437837.1	DUF5412 family protein	-
BSR08_RS10305 (BSR08_10475)	-	1877334..1877474 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=173394 BSR08_RS10275 WP_003229717.1 1872036..1872641(-) (ruvA) [Bacillus subtilis strain KH2]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=173394 BSR08_RS10275 WP_003229717.1 1872036..1872641(-) (ruvA) [Bacillus subtilis strain KH2]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408