Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | VVCECT4999_RS02080 | Genome accession | NZ_CP014636 |
| Coordinates | 416980..417627 (-) | Length | 215 a.a. |
| NCBI ID | WP_017420064.1 | Uniprot ID | A0A2S3SZL1 |
| Organism | Vibrio vulnificus strain CECT 4999 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 411980..422627
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VVCECT4999_RS02070 (VVCECT4999_02045) | uvrA | 412957..415779 (-) | 2823 | WP_026050227.1 | excinuclease ABC subunit UvrA | - |
| VVCECT4999_RS02075 (VVCECT4999_02050) | galU | 415922..416794 (-) | 873 | WP_017420065.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| VVCECT4999_RS02080 (VVCECT4999_02055) | qstR | 416980..417627 (-) | 648 | WP_017420064.1 | response regulator transcription factor | Regulator |
| VVCECT4999_RS02085 (VVCECT4999_02060) | ssb | 417927..418466 (+) | 540 | WP_011079389.1 | single-stranded DNA-binding protein | Machinery gene |
| VVCECT4999_RS02090 (VVCECT4999_02065) | csrD | 418617..420614 (+) | 1998 | WP_038964215.1 | RNase E specificity factor CsrD | - |
| VVCECT4999_RS02095 (VVCECT4999_02070) | - | 420627..422087 (+) | 1461 | WP_039449547.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 24730.69 Da Isoelectric Point: 9.8565
>NTDB_id=172845 VVCECT4999_RS02080 WP_017420064.1 416980..417627(-) (qstR) [Vibrio vulnificus strain CECT 4999]
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPNRLTTEELIGFGQCKAIFYRDTTIADMTKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPNRLTTEELIGFGQCKAIFYRDTTIADMTKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
Nucleotide
Download Length: 648 bp
>NTDB_id=172845 VVCECT4999_RS02080 WP_017420064.1 416980..417627(-) (qstR) [Vibrio vulnificus strain CECT 4999]
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACTGTATT
AGCGAAACAGATTCAAATGGAAATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGCTGAGAGAGATTAAAAACCTACCGCTAATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAACCGATTGACGACTGAGGAACTGATTGGCTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACAACCATTGCAGACATGACCAAAGGACTAAATTCGGTGATTAATGGTAAGAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGCTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGCTACGCTGCGTGCAGTCTGGCAAATCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGCGAGTTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAACTTTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACTGTATT
AGCGAAACAGATTCAAATGGAAATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGCTGAGAGAGATTAAAAACCTACCGCTAATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAACCGATTGACGACTGAGGAACTGATTGGCTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACAACCATTGCAGACATGACCAAAGGACTAAATTCGGTGATTAATGGTAAGAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGCTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGCTACGCTGCGTGCAGTCTGGCAAATCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGCGAGTTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAACTTTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
60.93 |
100 |
0.609 |
| qstR | Vibrio campbellii strain DS40M4 |
60.93 |
100 |
0.609 |
| qstR | Vibrio cholerae strain A1552 |
46.729 |
99.535 |
0.465 |