Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AYJ52_RS01490 Genome accession   NZ_CP014477
Coordinates   342388..342771 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AP_882     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 337388..347771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AYJ52_RS01475 (AYJ52_01475) pilJ 339285..341363 (-) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  AYJ52_RS01480 (AYJ52_01480) pilI 341406..341942 (-) 537 WP_017402633.1 chemotaxis protein CheW -
  AYJ52_RS01485 (AYJ52_01485) pilH 342003..342365 (-) 363 WP_002116220.1 response regulator -
  AYJ52_RS01490 (AYJ52_01490) pilG 342388..342771 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  AYJ52_RS01495 (AYJ52_01495) - 343056..343694 (+) 639 WP_017385895.1 hypothetical protein -
  AYJ52_RS01500 (AYJ52_01500) nolF 343763..344872 (+) 1110 WP_079380930.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=171818 AYJ52_RS01490 WP_000389061.1 342388..342771(-) (pilG) [Acinetobacter pittii strain AP_882]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=171818 AYJ52_RS01490 WP_000389061.1 342388..342771(-) (pilG) [Acinetobacter pittii strain AP_882]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment