Detailed information NTG0171817

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: AYJ52_RS00090
• Genome accession: NZ_CP014477
• Coordinates: 15935..18367 (-)
• Length: 810 a.a.
• NCBI ID: WP_017402795.1
• Uniprot ID: A0A009HB37
• Organism: Acinetobacter pittii strain AP_882
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	11254..19137	15935..18367	within	0

Gene organization within MGE regions

Location: 11254..19137

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AYJ52_RS00065 (AYJ52_00065)	purM	11254..12324 (+)	1071	WP_017385817.1	phosphoribosylformylglycinamidine cyclo-ligase	-
AYJ52_RS00070 (AYJ52_00070)	purN	12321..12950 (+)	630	WP_017385816.1	phosphoribosylglycinamide formyltransferase	-
AYJ52_RS00075 (AYJ52_00075)	-	13025..13825 (-)	801	WP_017385815.1	alpha/beta fold hydrolase	-
AYJ52_RS00080 (AYJ52_00080)	sppA	13849..14865 (-)	1017	WP_017385814.1	signal peptide peptidase SppA	-
AYJ52_RS00085 (AYJ52_00085)	-	14999..15982 (+)	984	WP_079381031.1	lysophospholipid acyltransferase family protein	-
AYJ52_RS00090 (AYJ52_00090)	comA/comEC	15935..18367 (-)	2433	WP_017402795.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AYJ52_RS00095 (AYJ52_00095)	lolD	18451..19137 (-)	687	WP_002118798.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92910.46 Da
• Isoelectric Point: 9.0738

>NTDB_id=171817 AYJ52_RS00090 WP_017402795.1 15935..18367(-) (comA/comEC) [Acinetobacter pittii strain AP_882]
MLKLILMGWIGGIAFMGIDIPLIMQYGWLDKVLLVMGFIFYIFKRNLFLNRPRLKTIYCLVCAISFFTIGHQYAQYALNE
RLELRQMQPKSLDIIVYVDRISEEKEDKTQQPVQVLGQSLHPVNWLLYLKNQKVNSAIDEPKLKLGHYYRISGKTKPAHS
YAVAGVFDQEQWFIQRNIMSGFSVQHIEPLSSDEIYQLGYQHHLKEQQKFFNRQKLNVEKLRLTFRLMLKQSPLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMLSWILHQLIRRYYPQLYLHQPKQIWTMIPLCFGVLIYTA
FVGFEIPALRTLLSVFLFAFLVLIKVAVKPFSLLVYSASLLLLFDPFSVLSAGFWLSYGSCFILLRIYQTIEQAPNVVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFKSFGNLLFQIND
VLISIVLSCFNLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLIIPDKSSQQIQLNIIDVGQGQ
SIFLQHTQQTWLIDTGGSYDEKAFSIGQNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPSIAQAFPIKQVIPNELWAEQ
IKEPFTYCHQGQKWQYPQLDIEILWPKEKDLNLVSSNQNQYSCVVYIHLKQINGYQNYLIMGDAGWEAEYQLMKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLKPKLVIASAGFNNRYGHPSKEVLARVQALNLAFKSTVEQGTLSFVSRNQEMVLYTRR
FERTWLHRSL

Nucleotide

• Length: 2433 bp

>NTDB_id=171817 AYJ52_RS00090 WP_017402795.1 15935..18367(-) (comA/comEC) [Acinetobacter pittii strain AP_882]
ATGTTAAAACTTATTTTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATAGATATCCCTTTAATAATGCAATATGG
GTGGTTAGATAAAGTCTTGCTTGTTATGGGCTTTATTTTTTATATTTTTAAGAGAAATTTATTCTTAAATCGCCCCAGAT
TAAAAACCATTTACTGTTTAGTCTGCGCTATTAGTTTTTTTACTATAGGACATCAATATGCTCAGTATGCCTTAAATGAA
AGATTAGAACTGCGACAAATGCAGCCTAAATCTTTAGATATTATTGTGTATGTCGACCGTATAAGTGAAGAAAAAGAAGA
TAAGACACAGCAACCCGTTCAGGTATTAGGGCAGTCCTTACATCCCGTCAATTGGCTATTATATTTAAAAAATCAAAAAG
TAAACTCAGCCATAGATGAGCCAAAATTAAAATTAGGTCATTATTATCGAATTTCTGGCAAAACCAAACCTGCTCATAGT
TACGCAGTGGCTGGTGTTTTTGACCAAGAACAGTGGTTCATTCAACGAAATATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCTGATGAAATTTATCAGTTGGGTTATCAACATCATTTAAAAGAGCAACAAAAATTCTTTAACAGAC
AAAAGTTAAATGTAGAAAAGTTGCGCCTAACATTTAGATTAATGTTAAAACAATCTCCTTTGCAAAATAAAGGTCTGTTA
TTAGCTTTGTTAACAGGGGACGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATCT
GTTAGCCATTTCAGGGCCTCATGTACTCATTTTTGCTATCATGTTGTCTTGGATATTACATCAATTAATAAGACGTTATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGACCATGATTCCATTATGTTTCGGTGTTTTAATTTATACGGCA
TTTGTTGGTTTTGAAATTCCCGCCTTAAGAACTTTACTCTCAGTATTTTTATTTGCTTTTTTGGTATTGATTAAAGTGGC
TGTTAAACCATTTTCACTCTTGGTTTATAGTGCAAGTCTACTTTTACTTTTCGATCCCTTCAGTGTTTTATCCGCAGGTT
TTTGGCTATCTTATGGTTCTTGCTTTATTTTATTACGGATTTATCAAACTATAGAGCAGGCTCCAAATGTTGTTTCAACT
AGTCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTGTGTCCCTT
AATGCTGATTTTCTTTCAACAGATTTCATGGGTTGCTCCTTTTACAAATATTATTGCAGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAATATTTTTGCAGCTTGTGTATGGCTTATTTTTAAATCATTCGGAAATTTACTTTTTCAAATTAATGAC
GTCCTGATTAGTATAGTACTGTCATGTTTTAATCTTTTAGAAAAGTTATCTCTACCATTACAAGGTTTTAGCCTCACACC
ACTTGATTTAGTGTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCCAAATCTTGGGGGCTAA
TATGCTGTTTACCCTTGATCATTCCAGATAAGTCGTCCCAGCAAATTCAATTAAATATTATAGATGTAGGACAGGGGCAA
TCTATATTCTTGCAGCACACGCAGCAGACATGGCTCATCGATACGGGTGGGTCTTATGATGAGAAAGCTTTTAGTATTGG
TCAAAATGTGGTGATTCCATATTTACGTCAAAAGGGAATTAAACAACTGGATCACGTCGTACTGTCTCATCTTGATCAAG
ATCATAGCGGAGCATTTCCTTCAATCGCTCAGGCTTTTCCTATTAAACAAGTCATACCAAATGAATTATGGGCAGAGCAA
ATTAAAGAACCATTTACCTATTGTCATCAAGGTCAAAAATGGCAATATCCACAATTAGATATTGAAATTCTTTGGCCTAA
AGAAAAAGATTTAAACTTAGTTTCTTCAAATCAAAATCAATATTCTTGTGTGGTTTATATTCATTTAAAACAGATAAATG
GCTATCAAAATTATTTAATTATGGGCGATGCAGGGTGGGAAGCAGAATATCAACTCATGAAAGAATATCCTGATTTAAAG
GTAGATGTTTTGGTATTAGGACATCATGGGAGTAAGCATAGTTCAGCTTACGACTTTTTAGCGACTCTAAAACCAAAGCT
TGTTATTGCTTCAGCTGGCTTCAATAATCGTTATGGTCATCCAAGCAAAGAGGTTTTAGCGAGAGTACAAGCACTTAATC
TTGCGTTTAAAAGCACAGTTGAACAAGGAACATTAAGCTTTGTATCTCGCAATCAAGAGATGGTTTTATATACTCGACGT
TTCGAGCGTACTTGGCTTCACAGGAGTTTGTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (243-522)

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-643)

3D structure

• AlphaFold DB: A0A009HB37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	70.087	99.877	0.7
comA/comEC	Acinetobacter baumannii strain A118	69.468	99.877	0.694
comA/comEC	Acinetobacter baylyi ADP1	49.02	100	0.494