Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BKM66_RS02940 Genome accession   NZ_CP017666
Coordinates   587930..588613 (+) Length   227 a.a.
NCBI ID   WP_012027525.1    Uniprot ID   A0A0H3MWH7
Organism   Streptococcus suis strain 0061     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 582930..593613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM66_RS02925 (BKM66_02890) - 583834..584958 (+) 1125 WP_105120008.1 aminotransferase -
  BKM66_RS02930 (BKM66_02895) - 585086..586667 (+) 1582 Protein_518 IS1182 family transposase -
  BKM66_RS02935 (BKM66_02900) - 586579..587760 (-) 1182 WP_105120359.1 DUF2974 domain-containing protein -
  BKM66_RS02940 (BKM66_02905) braR 587930..588613 (+) 684 WP_012027525.1 response regulator transcription factor Regulator
  BKM66_RS02945 (BKM66_02910) - 588606..589598 (+) 993 WP_105120358.1 sensor histidine kinase -
  BKM66_RS02950 (BKM66_02915) - 589694..590452 (+) 759 WP_044685119.1 ABC transporter ATP-binding protein -
  BKM66_RS02955 (BKM66_02920) - 590454..592457 (+) 2004 WP_105120357.1 FtsX-like permease family protein -
  BKM66_RS10350 (BKM66_02925) - 592646..592810 (+) 165 WP_105120356.1 hypothetical protein -
  BKM66_RS02965 (BKM66_02930) - 592807..593124 (+) 318 WP_105120355.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26581.80 Da        Isoelectric Point: 4.5525

>NTDB_id=170329 BKM66_RS02940 WP_012027525.1 587930..588613(+) (braR) [Streptococcus suis strain 0061]
MQKILLIEDDKTISQLVAKNLINWGYQVQEVKDFQMVLEQMEEFQPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSS
HDQPMDIVMAINMGADDYVTKPFEMTVLLAKIQGLLRRTYDFVGEQSLLWFEEISLDLKTMQVSYGQVVEELTRNEFQIL
RVLFEHGKEVVSREELMRELWNSDIFVDDNTLSVNIARLRKKLAELDLPDVIATKKGVGYGLVWTHE

Nucleotide


Download         Length: 684 bp        

>NTDB_id=170329 BKM66_RS02940 WP_012027525.1 587930..588613(+) (braR) [Streptococcus suis strain 0061]
ATGCAGAAAATTCTTCTTATCGAGGATGATAAAACGATTAGCCAACTAGTTGCTAAAAACTTGATAAACTGGGGTTACCA
GGTGCAAGAGGTCAAGGATTTTCAGATGGTTTTGGAACAGATGGAAGAGTTTCAGCCCCATTTGATTTTACTGGATATTG
GCCTGCCTTTTTTCAATGGCTATTACTGGTGTCAGGAAATTCGCAAGACCTCCCGTGTGCCCATTATGTTTCTGTCTTCC
CATGACCAGCCAATGGATATTGTTATGGCGATCAATATGGGGGCGGATGACTATGTGACCAAGCCCTTTGAAATGACGGT
TCTCCTGGCCAAAATACAGGGGCTTCTTAGAAGAACCTATGACTTTGTCGGCGAACAAAGTTTGCTCTGGTTTGAGGAGA
TTTCTCTAGACTTAAAGACCATGCAGGTGTCCTATGGACAGGTTGTGGAAGAACTGACGCGAAATGAATTTCAGATTTTA
CGCGTTTTATTTGAACATGGCAAGGAAGTGGTCAGCCGCGAGGAGCTGATGAGAGAACTCTGGAATAGTGATATTTTTGT
GGATGACAATACTTTATCGGTTAACATCGCTCGCCTGCGTAAGAAATTGGCAGAACTGGATCTGCCAGATGTGATTGCGA
CCAAGAAAGGAGTAGGCTACGGCCTGGTGTGGACACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MWH7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.706

96.035

0.458
  vicR Streptococcus mutans UA159

39.13

100

0.396
  micA Streptococcus pneumoniae Cp1015

37.991

100

0.383

Multiple sequence alignment