Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   AXE83_RS02925 Genome accession   NZ_CP014264
Coordinates   607666..609648 (+) Length   660 a.a.
NCBI ID   WP_060955361.1    Uniprot ID   A0A0X8JX89
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 602666..614648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS02915 (AXE83_02915) - 604803..606905 (+) 2103 WP_060955360.1 ATP-dependent Clp protease ATP-binding subunit -
  AXE83_RS02920 (AXE83_02920) - 606960..607442 (-) 483 WP_000032544.1 S-ribosylhomocysteine lyase -
  AXE83_RS02925 (AXE83_02925) amiA 607666..609648 (+) 1983 WP_060955361.1 peptide ABC transporter substrate-binding protein Regulator
  AXE83_RS02930 (AXE83_02930) pbp1a 610012..612168 (-) 2157 WP_060955362.1 penicillin-binding protein PBP1A -
  AXE83_RS02935 (AXE83_02935) recU 612165..612761 (-) 597 WP_060955363.1 Holliday junction resolvase RecU -
  AXE83_RS02940 (AXE83_02940) - 612829..613356 (+) 528 WP_060955364.1 DUF1273 domain-containing protein -
  AXE83_RS02945 (AXE83_02945) gpsB 613426..613755 (+) 330 WP_000146538.1 cell division regulator GpsB -

Sequence

Protein


Download         Length: 660 a.a.        Molecular weight: 73216.72 Da        Isoelectric Point: 4.5891

>NTDB_id=169987 AXE83_RS02925 WP_060955361.1 607666..609648(+) (amiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MKFSKVMALAGVTLLASGVLAACSGSGSSAKGEKTFSYVYETDPDSLNYLTTGKAAVANITSNVIDGLMENDRYGNFVPS
LAEDWSVSKDGLTYTYTIRKDAKWYTSEGEEYAPVKAQDFVTGLKYAADNKSEALYLVQESIKGLDAYVKGEVKDFSEVG
IKAVDDQTVQYTLNKPESFWNSKTTMGILAPVNEEFLTSKGSDFAKATDPSSILYNGPFLLKSLVAKSSVEFEKNPNYWD
KDNVHIDKVKLSFWDGQDNNKLAETFKDGGFSMARLFPTSGSYSELEKEFKDNIVYTPQDSATFLVGTNIDRQSYKYTSK
TTDEQKTSTKKALLNKDFRQAIAFGFDRTAYASQVNGESGASKLLRNLFVPPTFVQADGKNFGELVKEKLVTYGDEWKDV
NLDDAQDGLYNPEKAKAEFAKAKTALQAEGVQFPIHLDMPVDQTNTTKVQRVQSLKQSLEATLGTDNVVIDIQQLQKDEV
LNVTYFAETAAGEDWDLSDNVGWSPDYIDPSTYLDIIKPSVGENTKTYLGFDSGTNNAAAKQVGLEDYEKMVVEAGNEDT
DVSKRYDKYAAAQAWLTDSALIIPTTSQTGRPMLSKMVPFTLPFAYSGNKGMSEALLYKYLELQDKPVTADEYQKAQDKW
KKEKEESNKKAQEDLANHVK

Nucleotide


Download         Length: 1983 bp        

>NTDB_id=169987 AXE83_RS02925 WP_060955361.1 607666..609648(+) (amiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAAATTTTCAAAAGTAATGGCCCTAGCAGGAGTGACTCTGTTAGCGTCAGGTGTTTTGGCAGCTTGTTCAGGTTCAGG
CTCTAGTGCAAAAGGTGAGAAAACTTTTTCTTATGTTTATGAAACTGACCCAGACAGCCTAAACTATTTGACAACTGGTA
AGGCTGCGGTTGCTAATATCACAAGTAATGTTATTGACGGTTTGATGGAGAATGACCGCTACGGTAACTTCGTGCCATCT
TTGGCAGAAGATTGGTCAGTGTCTAAAGACGGGTTAACTTACACTTACACAATCCGTAAGGATGCTAAGTGGTATACTTC
TGAAGGCGAAGAGTATGCGCCAGTGAAAGCGCAAGACTTTGTAACAGGTCTTAAATATGCGGCTGATAATAAGTCAGAAG
CCCTTTATCTTGTTCAAGAATCTATTAAAGGTCTTGATGCTTATGTAAAAGGTGAAGTTAAAGACTTCTCAGAAGTTGGA
ATCAAGGCTGTAGATGATCAAACAGTTCAATACACTTTGAACAAACCAGAAAGCTTCTGGAACTCTAAGACAACCATGGG
AATTCTTGCACCAGTCAATGAAGAATTCCTTACTTCTAAAGGAAGTGACTTTGCCAAAGCAACTGATCCAAGCAGTATCC
TTTATAATGGTCCTTTCTTGTTAAAATCATTAGTAGCAAAATCTTCAGTAGAATTTGAAAAGAATCCAAACTACTGGGAT
AAGGACAATGTTCATATTGATAAAGTAAAACTTTCATTCTGGGATGGTCAAGACAATAACAAACTTGCAGAAACCTTTAA
AGATGGTGGTTTCTCAATGGCTCGTCTCTTCCCAACAAGTGGAAGCTACTCTGAACTTGAAAAAGAGTTTAAAGACAATA
TCGTTTATACACCACAAGATTCTGCTACTTTCTTAGTTGGTACAAATATTGACCGTCAGTCTTACAAATATACTTCTAAG
ACTACAGATGAGCAAAAGACTTCAACTAAGAAAGCTCTTCTTAACAAAGACTTCCGTCAAGCTATTGCCTTCGGTTTCGA
TAGAACAGCATATGCTTCTCAAGTTAATGGAGAAAGTGGAGCAAGCAAACTCCTTCGTAACTTGTTCGTACCACCAACAT
TTGTTCAAGCAGATGGTAAAAACTTTGGAGAGTTAGTTAAGGAAAAATTAGTTACCTATGGTGATGAGTGGAAAGATGTT
AATCTAGACGACGCTCAAGACGGTCTTTACAATCCTGAAAAAGCAAAAGCAGAATTTGCTAAGGCTAAGACAGCTCTCCA
AGCGGAAGGTGTTCAATTCCCAATCCACTTGGATATGCCTGTTGACCAAACCAATACTACAAAAGTTCAACGTGTTCAAT
CATTGAAACAATCGCTTGAAGCAACATTAGGAACTGACAATGTCGTTATTGATATCCAACAACTTCAAAAAGATGAAGTC
CTCAATGTTACTTACTTTGCTGAAACGGCTGCCGGTGAAGATTGGGACCTTTCAGATAACGTTGGTTGGTCTCCAGACTA
CATCGACCCATCTACATACCTTGATATCATCAAACCATCTGTAGGTGAAAATACTAAGACTTACCTAGGATTTGATTCAG
GTACAAACAACGCTGCTGCCAAACAAGTTGGTTTGGAAGATTACGAAAAGATGGTTGTTGAAGCTGGAAATGAAGACACT
GACGTTTCAAAACGTTATGATAAATATGCTGCAGCCCAAGCTTGGTTGACAGATAGTGCATTGATTATTCCAACAACTTC
TCAAACTGGACGTCCAATGTTGTCTAAGATGGTACCATTCACACTTCCATTTGCTTACTCAGGTAACAAGGGTATGAGTG
AAGCCCTCTTGTACAAATACCTTGAACTTCAAGATAAACCAGTAACTGCTGATGAATATCAAAAAGCTCAAGATAAATGG
AAGAAAGAAAAAGAAGAATCTAATAAAAAAGCGCAAGAAGATCTTGCAAATCATGTCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8JX89

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

60.212

100

0.603
  amiA3 Streptococcus thermophilus LMD-9

60.061

100

0.602
  amiA3 Streptococcus thermophilus LMG 18311

59.607

100

0.597

Multiple sequence alignment