Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | AXF37_RS10075 | Genome accession | NZ_CP014257 |
| Coordinates | 2237246..2237560 (-) | Length | 104 a.a. |
| NCBI ID | WP_061691663.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pascullei strain D-7119 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2232246..2242560
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXF37_RS10050 (AXF37_10045) | - | 2232704..2233204 (-) | 501 | WP_061691666.1 | hypothetical protein | - |
| AXF37_RS10055 (AXF37_10050) | - | 2233663..2234523 (+) | 861 | WP_027265082.1 | polysaccharide deacetylase family protein | - |
| AXF37_RS10060 (AXF37_10055) | - | 2234641..2235837 (-) | 1197 | WP_011214245.1 | murein transglycosylase A | - |
| AXF37_RS10065 (AXF37_10060) | lpp1976 | 2235947..2236504 (-) | 558 | WP_061691665.1 | hypothetical protein | Machinery gene |
| AXF37_RS10070 (AXF37_10065) | lpp1977 | 2236501..2237307 (-) | 807 | WP_061691664.1 | PilW family protein | Machinery gene |
| AXF37_RS10075 (AXF37_10070) | lpp1978 | 2237246..2237560 (-) | 315 | WP_061691663.1 | type IV pilus modification PilV family protein | Machinery gene |
| AXF37_RS10080 (AXF37_10075) | hisC | 2237720..2238829 (+) | 1110 | WP_061691662.1 | histidinol-phosphate transaminase | - |
| AXF37_RS10085 (AXF37_10080) | - | 2238866..2239207 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| AXF37_RS10090 (AXF37_10085) | secF | 2239399..2240316 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| AXF37_RS10095 (AXF37_10090) | secD | 2240329..2242185 (-) | 1857 | WP_027222177.1 | protein translocase subunit SecD | - |
| AXF37_RS10100 (AXF37_10095) | yajC | 2242207..2242542 (-) | 336 | WP_027222178.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12335.42 Da Isoelectric Point: 8.4863
>NTDB_id=169874 AXF37_RS10075 WP_061691663.1 2237246..2237560(-) (lpp1978) [Legionella pneumophila subsp. pascullei strain D-7119]
MSKHQGFTLLEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRFYELDAN
MSKHQGFTLLEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRFYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=169874 AXF37_RS10075 WP_061691663.1 2237246..2237560(-) (lpp1978) [Legionella pneumophila subsp. pascullei strain D-7119]
ATGAGCAAGCATCAGGGTTTCACTCTATTGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATACGCTTCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTATTGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATACGCTTCTATGAGCTGGATGCTAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
93.269 |
100 |
0.933 |
| lpp1978 | Legionella pneumophila str. Paris |
91.346 |
100 |
0.913 |