Detailed information NTG0169370

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AWU82_RS01285
• Genome accession: NZ_CP014205
• Coordinates: 279683..281926 (-)
• Length: 747 a.a.
• NCBI ID: WP_064383507.1
• Uniprot ID: -
• Organism: Pseudomonas glycinae strain MS586
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 274683..286926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AWU82_RS01250 (AWU82_24815)	murB	275083..276102 (-)	1020	WP_064383499.1	UDP-N-acetylmuramate dehydrogenase	-
AWU82_RS01255 (AWU82_24820)	-	276099..276563 (-)	465	WP_007950772.1	low molecular weight protein-tyrosine-phosphatase	-
AWU82_RS01260 (AWU82_24825)	kdsB	276563..277327 (-)	765	WP_064383500.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AWU82_RS01265 (AWU82_24830)	-	277324..277509 (-)	186	WP_003179363.1	Trm112 family protein	-
AWU82_RS01270 (AWU82_24835)	lpxK	277534..278544 (-)	1011	WP_064383502.1	tetraacyldisaccharide 4'-kinase	-
AWU82_RS01275 (AWU82_24840)	-	278544..278972 (-)	429	WP_064383505.1	ExbD/TolR family protein	-
AWU82_RS01280 (AWU82_24845)	exbB	278969..279604 (-)	636	WP_163976130.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
AWU82_RS01285 (AWU82_24850)	comA	279683..281926 (-)	2244	WP_064383507.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AWU82_RS01290 (AWU82_24855)	-	282063..282581 (+)	519	WP_064383508.1	DUF2062 domain-containing protein	-
AWU82_RS01295 (AWU82_24860)	-	282636..283415 (-)	780	WP_011335453.1	ABC transporter permease	-
AWU82_RS01300 (AWU82_24865)	-	283412..284344 (-)	933	WP_011335454.1	ABC transporter ATP-binding protein	-
AWU82_RS01305 (AWU82_24870)	-	284478..285101 (-)	624	WP_041475399.1	glutathione S-transferase family protein	-
AWU82_RS01310 (AWU82_24875)	-	285145..285804 (-)	660	WP_041475400.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 747 a.a.
• Molecular weight: 81702.84 Da
• Isoelectric Point: 10.0927

>NTDB_id=169370 AWU82_RS01285 WP_064383507.1 279683..281926(-) (comA) [Pseudomonas glycinae strain MS586]
MRTGMMALAVGLLAPVFLPALPPVGLLLVLPWVALMLLPFRSYPLAFLLLGFTWASFSAQLALDDRLPSRLDGETRWVEG
RVVGLPQNAEGVVRFELADARSRHEKLPSLMRLAWYAGPEVKSGERWRLAVKLKRPGGLLNPDAFDYEAWLLAQRIGATG
TVKDGQRLAPAQWAWRDSIRQRLLAVDAQGRNGALAALVLGDGSGLSREDWQILQDTGTVHLLVISGQHIGLLAALLYVL
VAGMARVGIWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVRRACVMVALVLLWRLRFRHLGAWWPLLLAFNGVLLMDPL
ASLRPGLWLSFIAVAVLIFTFGGRLGPWRWWQTWTRAQWLIAIGLCPVLLALSLPISLSGPLANLLAVPWVSFAVLPPAL
LGTLLLPIPYVGEGLLWLAGGLIDGLFRSLALIAGRWPAWVAASMPGWGLALGCIGALLLLLPRGVPLRPLGWPLLLVLA
FAPRERLAEGVADVWQLDVGQGLAIVVRTRHHTLLYDSGPRFGDFDAGERVVLPALHKLGVNHLDLMLLSHADADHAGGA
LAVVKGLPVSFVISGDPPGLPEALNAEACETGRQWQWDGVAFHLWQWADAHDSNQRSCVLQIEANGERLLLTGDIDSAAE
RDLLNSVLAVPTQWLQAPHHGSRSSSSMALLKVLQPHAVLISRGQGNSFGHPHPTVIARYRKQGIHIHDSAEQGAIHLQL
GRFQPARSMRQQRRFWRAPPLPGAEYR

Nucleotide

• Length: 2244 bp

>NTDB_id=169370 AWU82_RS01285 WP_064383507.1 279683..281926(-) (comA) [Pseudomonas glycinae strain MS586]
ATGCGCACAGGGATGATGGCGCTGGCGGTCGGTCTGCTGGCCCCGGTTTTTTTACCGGCCTTGCCGCCGGTCGGGTTATT
GCTGGTGTTGCCGTGGGTGGCGCTGATGCTGCTGCCGTTTCGCAGCTATCCACTGGCGTTTTTACTGCTTGGATTTACAT
GGGCGAGCTTCAGCGCGCAGCTGGCGCTGGATGATCGACTACCTTCCCGGCTGGATGGCGAAACGCGCTGGGTGGAGGGG
CGGGTCGTCGGCTTGCCGCAGAATGCCGAAGGTGTCGTGCGCTTCGAACTGGCCGATGCGCGTTCGCGTCACGAGAAACT
GCCGTCGCTGATGCGTCTGGCCTGGTACGCCGGGCCTGAGGTCAAAAGTGGCGAACGCTGGCGACTGGCGGTCAAGCTCA
AGCGTCCCGGCGGCCTGCTCAATCCGGATGCGTTCGATTACGAAGCCTGGCTGCTGGCGCAGCGCATCGGCGCCACCGGG
ACGGTGAAAGATGGCCAGCGTCTGGCGCCGGCGCAGTGGGCTTGGCGTGACAGCATCCGGCAGCGCCTGCTTGCAGTGGA
TGCCCAGGGACGCAACGGAGCCTTGGCTGCGCTGGTGCTCGGCGATGGTTCTGGGCTCAGTCGCGAGGACTGGCAGATCT
TGCAGGACACCGGCACCGTGCACCTGCTGGTGATTTCCGGTCAGCACATCGGGCTGTTGGCGGCGTTGCTGTATGTGTTG
GTCGCCGGGATGGCACGGGTCGGGATTTGGCCGCTGCGTTGGCCCTGGCTGCCCTGGGCGTGCGGTCTGGCATTCGCGGC
GGCGCTGGGTTACGGCCTGCTGGCCGGGTTCGATGTGCCGGTGCGACGGGCCTGCGTGATGGTTGCGCTGGTGCTGCTGT
GGCGATTGCGATTTCGCCATCTCGGTGCCTGGTGGCCGTTGCTGCTGGCCTTCAACGGCGTGTTGTTGATGGACCCGCTG
GCCAGCTTGCGTCCGGGGTTGTGGCTATCCTTTATCGCGGTCGCCGTGCTGATCTTCACCTTCGGCGGCCGTCTGGGGCC
GTGGCGCTGGTGGCAAACCTGGACGCGCGCGCAGTGGTTGATCGCGATCGGCTTGTGCCCGGTGCTGCTGGCGCTGAGTC
TGCCGATCAGTCTCAGCGGGCCACTGGCCAATCTGCTGGCGGTGCCGTGGGTCAGTTTTGCGGTGTTGCCTCCGGCGTTG
CTGGGCACATTGCTGCTGCCGATCCCTTATGTCGGGGAAGGGCTGCTGTGGCTGGCGGGCGGACTGATCGACGGGTTGTT
CCGATCACTTGCCCTGATTGCCGGGCGGTGGCCGGCGTGGGTTGCGGCGTCGATGCCGGGATGGGGTCTGGCGCTGGGCT
GCATCGGTGCACTGCTGTTATTGCTGCCCCGAGGCGTTCCCCTGCGTCCCTTGGGCTGGCCGTTGCTGCTGGTGCTGGCA
TTTGCGCCCCGGGAGCGACTGGCCGAAGGCGTGGCCGATGTCTGGCAACTGGACGTCGGCCAGGGCCTGGCGATAGTGGT
CCGTACCCGGCATCACACTTTGCTGTACGACAGCGGCCCGCGCTTCGGTGACTTTGATGCAGGCGAGCGGGTGGTGCTGC
CGGCCTTGCACAAACTGGGCGTAAACCACCTCGACCTGATGCTGCTCAGCCATGCCGATGCCGATCACGCGGGGGGAGCA
CTGGCCGTGGTGAAAGGCTTGCCGGTCAGCTTCGTCATCAGCGGCGACCCGCCGGGTCTGCCCGAAGCGCTCAACGCCGA
GGCCTGTGAAACCGGGCGGCAATGGCAGTGGGACGGCGTGGCCTTCCATCTATGGCAGTGGGCTGACGCCCATGACAGCA
ACCAGCGTTCCTGCGTGTTGCAGATCGAAGCCAATGGCGAACGGTTGCTGCTGACCGGCGACATCGACAGCGCCGCTGAA
CGGGACCTGCTCAACAGCGTGCTGGCAGTTCCCACCCAGTGGCTGCAAGCCCCGCACCATGGCAGCCGCAGTTCCTCATC
GATGGCCTTGCTCAAGGTTTTGCAGCCTCATGCCGTGCTGATTTCCCGGGGGCAGGGCAATTCGTTCGGCCATCCGCACC
CGACGGTCATTGCCCGCTACCGCAAACAGGGCATACATATCCATGACAGCGCCGAGCAGGGTGCCATTCATCTGCAACTG
GGGCGGTTTCAGCCGGCCCGGTCGATGCGTCAACAACGCCGGTTCTGGCGCGCCCCGCCGTTGCCGGGGGCGGAGTACCG
TTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (24-167)

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.092	96.118	0.606
comA	Ralstonia pseudosolanacearum GMI1000	34.86	100	0.367