Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   AWJ15_RS03985 Genome accession   NZ_CP014201
Coordinates   768576..769817 (-) Length   413 a.a.
NCBI ID   WP_077069406.1    Uniprot ID   -
Organism   Lacticaseibacillus rhamnosus strain BFE5264     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 763576..774817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWJ15_RS03980 (AWJ15_03625) - 766822..768552 (-) 1731 WP_077069405.1 proline--tRNA ligase -
  AWJ15_RS03985 (AWJ15_03630) eeP 768576..769817 (-) 1242 WP_077069406.1 RIP metalloprotease RseP Regulator
  AWJ15_RS03990 (AWJ15_03635) - 769834..770622 (-) 789 WP_005711688.1 phosphatidate cytidylyltransferase -
  AWJ15_RS03995 (AWJ15_03640) - 770658..771410 (-) 753 WP_005684322.1 isoprenyl transferase -
  AWJ15_RS04000 (AWJ15_03645) frr 771908..772465 (-) 558 WP_005684323.1 ribosome recycling factor -
  AWJ15_RS04005 (AWJ15_03650) pyrH 772465..773184 (-) 720 WP_005684324.1 UMP kinase -
  AWJ15_RS04010 (AWJ15_03655) tsf 773553..774434 (-) 882 WP_005684325.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45281.88 Da        Isoelectric Point: 7.4658

>NTDB_id=169326 AWJ15_RS03985 WP_077069406.1 768576..769817(-) (eeP) [Lacticaseibacillus rhamnosus strain BFE5264]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSIILNDAGTVTRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDEEKLERWSVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLIVNFAGPMNNFILAILTFIIYGLMFGVQVLNTNQIGTVLPGYPAAQAGLKSNATIQAIDGEKIHSFTDL
SSKVSKQAGKSVTFTVKEHGKTQNVVIKPNKDGKIGVEVLIEKSPARAFTYGFTQTWDLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGLQGLLFFMGYLSLGLGISNLLPIPVLDGGKILLNLIELIRRKPLKPETEGVVTMVGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=169326 AWJ15_RS03985 WP_077069406.1 768576..769817(-) (eeP) [Lacticaseibacillus rhamnosus strain BFE5264]
ATGACCACAATCATTGCCTTTATTGTTATCTTCTGCATTCTTGTGGTGGTTCACGAGTTTGGCCATTTTTATTTTGCCAA
GCGCAGCGGAATATTAGTGCGTGAGTTTTCGATTGGCATGGGGCCTAAGCTATGGGCGTCACATAAGAATAATACGACCT
ATACCTTGCGCTTGTTGCCACTGGGCGGATATGTACGCATGGCTGGCTGGCAGGATGAGGAAGATGAAATCAAGCCCGGG
ACCATGCTGAGTATTATCCTGAATGATGCCGGTACAGTGACGCGGATTAATGCCAGTGATAAAACAACGCTGGCAGGTGG
CATGCCGGTACAAGTAAGCCGCGTAGACCTCGTTAAAGACTTGGTGATTGAAGGCTACCCTAATGGCGACGAAGAGAAAC
TGGAGCGTTGGTCGGTTGACCATGATGCCACGATTATTGAAGAAGATGGCACCGAAGTTCAAATTGCGCCAGAAGATGTC
CAATTTCAAAATGCCCCGGTTTGGCGGCGTCTAATTGTTAACTTTGCCGGTCCGATGAATAATTTTATTCTTGCCATTTT
GACCTTTATTATTTACGGTTTGATGTTTGGCGTGCAGGTCTTAAATACCAATCAAATCGGAACGGTACTGCCCGGTTATC
CTGCTGCTCAAGCCGGGCTTAAGTCAAATGCCACAATTCAGGCGATTGATGGTGAAAAAATCCATTCTTTTACTGATCTT
TCCAGCAAAGTCAGCAAACAGGCCGGTAAGTCGGTGACGTTTACAGTTAAAGAGCATGGCAAAACGCAAAATGTGGTCAT
CAAGCCTAACAAGGATGGCAAGATCGGCGTGGAAGTACTCATCGAAAAATCACCGGCACGGGCGTTTACGTATGGTTTCA
CCCAAACCTGGGATTTAGCTGTGCGCACTTGGGATGTCCTCAAATCCATGGTAACTGGCGGCTTTTCGCTTAATAAGCTA
GCCGGGCCGGTCGGAATTTATACTATGACCAGTCAAAGTGCTAAAGGCGGATTGCAGGGATTGCTATTCTTTATGGGATA
CTTAAGTCTCGGCTTGGGAATCAGCAATTTGTTGCCAATCCCGGTTCTGGATGGTGGTAAAATTTTACTGAATCTCATTG
AACTGATTCGGCGCAAACCCTTGAAGCCTGAAACAGAAGGTGTTGTCACCATGGTTGGCCTCGGGTTGATGGTGCTCCTG
ATGCTCGCCGTGACGATTAATGATATTATGCGTTACTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-400)

PDZ domain (PDZ_6)

(206-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.821

100

0.501
  eeP Streptococcus thermophilus LMD-9

48.585

100

0.499

Multiple sequence alignment