Detailed information NTG0168926

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PcP3B5_RS09565
• Genome accession: NZ_CP014158
• Coordinates: 2110351..2112558 (+)
• Length: 735 a.a.
• NCBI ID: WP_203228559.1
• Uniprot ID: -
• Organism: Pseudomonas citronellolis strain P3B5
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2105351..2117558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PcP3B5_RS09545 (PcP3B5_19430)	-	2105832..2107085 (+)	1254	WP_009621388.1	lipoprotein-releasing ABC transporter permease subunit	-
PcP3B5_RS09550 (PcP3B5_19440)	lolD	2107078..2107761 (+)	684	WP_009621390.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PcP3B5_RS09555 (PcP3B5_19450)	-	2107778..2109028 (+)	1251	WP_043267283.1	lipoprotein-releasing ABC transporter permease subunit	-
PcP3B5_RS09560 (PcP3B5_19460)	-	2109684..2110214 (-)	531	WP_061561111.1	DUF2062 domain-containing protein	-
PcP3B5_RS09565 (PcP3B5_19470)	comA	2110351..2112558 (+)	2208	WP_203228559.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PcP3B5_RS09570 (PcP3B5_19480)	exbB	2112631..2113266 (+)	636	WP_009621398.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PcP3B5_RS09575 (PcP3B5_19490)	-	2113263..2113709 (+)	447	WP_009621400.1	ExbD/TolR family protein	-
PcP3B5_RS09580 (PcP3B5_19500)	lpxK	2113709..2114707 (+)	999	WP_061561113.1	tetraacyldisaccharide 4'-kinase	-
PcP3B5_RS09585 (PcP3B5_19510)	-	2114748..2114933 (+)	186	WP_009621404.1	Trm112 family protein	-
PcP3B5_RS09590 (PcP3B5_19520)	kdsB	2114947..2115711 (+)	765	WP_009621406.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PcP3B5_RS09595 (PcP3B5_19530)	-	2115711..2116175 (+)	465	WP_061561114.1	low molecular weight protein-tyrosine-phosphatase	-
PcP3B5_RS09600 (PcP3B5_19540)	murB	2116172..2117191 (+)	1020	WP_061561115.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 78584.86 Da
• Isoelectric Point: 8.0632

>NTDB_id=168926 PcP3B5_RS09565 WP_203228559.1 2110351..2112558(+) (comA) [Pseudomonas citronellolis strain P3B5]
MMALACGLVLLRFLPQLPPLAALLPLVGMALLCLYRRHHAVALFLLGFAWACLFAHDSWEGRLAPELDGRTLWLEGQVAG
LPASADGIVRFELEDVQARLDLPGRIRVSWYGGPEVRAGERWRLAVTLRRPHGLANDFGFDYEAWLAADGIGATGSVKDG
RRLAEAAGPMAWREAWKDRLLAVDARGRNAYLVALVLGDGSGLGRDDWDMLQDTGTLHLMVISGSHISLLGGLLYALVAG
LARLGAWPARVPWLPCACAVALAGAWGYGWIAGLQVPALRACLMLSMVLLWRLHFRRQGVWLPLLGALLVVLLVDPLVSL
TPGFWLSFAAVALLVYGFAGRLGRGAGWLAWGRAQWLMALGLAPVLLALGLPLSPAGALANLIAVPCVELLVVPLALVGS
LLLWLPVVGEGLLWLAGGVLDVLLGLLGRLSLYSPAWHPMAPPPWSIALALFGALLCLAPVGLPLRPLGLALLLPMFWPH
SSAPPHGHAEVRVLDVGQGLSVLIRTRQHTWLYDAGPRRGDFDLGEVAVLPTLRGLGIERLDMLLLSHADNDHAGGARSV
AAAVPVARIISGEPGRLPDSLPAGPCGNEAWQLDGVRFSTWQWPDATDSNGRSCVLYVEAGGESLLLTGDLPAAGEAAWL
ASHPGLGADWLLAGHHGSRSASSAAFVRQLAPRAALVSRSRHNAHGHPSSEVLQRFAEQGTKVHDVAREGALRLLLGQRG
TLRGVRENAGFWREK

Nucleotide

• Length: 2208 bp

>NTDB_id=168926 PcP3B5_RS09565 WP_203228559.1 2110351..2112558(+) (comA) [Pseudomonas citronellolis strain P3B5]
ATGATGGCGCTGGCCTGCGGCCTGGTGCTGCTGCGTTTCCTGCCCCAGCTGCCACCCTTGGCGGCCCTGCTGCCATTGGT
CGGAATGGCGCTGCTGTGCCTGTATCGGCGACATCACGCGGTGGCGCTCTTCCTGCTCGGCTTCGCCTGGGCCTGCCTGT
TCGCCCATGACTCGTGGGAAGGGCGCCTGGCTCCCGAACTGGACGGGCGGACGCTGTGGCTGGAAGGGCAGGTTGCCGGC
CTGCCGGCTAGCGCGGATGGCATCGTCCGCTTCGAGCTGGAGGACGTCCAGGCGCGCCTGGACCTGCCCGGGCGCATCCG
CGTGTCCTGGTACGGCGGCCCGGAGGTGCGGGCCGGGGAGCGCTGGCGCCTGGCGGTCACCCTGCGCCGCCCCCATGGCC
TGGCCAACGACTTCGGTTTCGACTATGAAGCCTGGCTGGCGGCCGACGGCATAGGCGCCACCGGCAGCGTCAAGGATGGC
CGGCGCCTGGCCGAGGCCGCCGGCCCCATGGCCTGGCGCGAAGCCTGGAAGGACCGGCTGCTGGCGGTGGATGCCCGGGG
ACGCAACGCCTACCTGGTGGCCCTGGTCCTCGGCGACGGCAGCGGCCTGGGCCGGGACGACTGGGACATGCTGCAGGACA
CCGGCACCCTGCACCTGATGGTGATCTCCGGCTCGCACATCTCCCTGCTGGGCGGCTTGCTCTACGCCCTGGTGGCGGGT
TTGGCGCGCCTGGGAGCCTGGCCCGCGCGCGTGCCCTGGCTGCCCTGCGCCTGTGCCGTTGCACTGGCTGGCGCCTGGGG
CTATGGCTGGATCGCCGGACTGCAGGTGCCGGCGCTGCGTGCCTGCCTGATGCTCAGCATGGTGCTGCTGTGGCGCCTGC
ACTTTCGTCGCCAGGGCGTCTGGCTGCCGCTGCTCGGCGCTCTGCTGGTGGTGCTGCTGGTCGATCCATTGGTCAGCCTG
ACGCCCGGCTTCTGGCTGTCCTTCGCCGCCGTGGCGCTGCTCGTCTACGGCTTCGCCGGGCGCCTGGGGCGGGGGGCCGG
CTGGCTGGCCTGGGGGCGCGCGCAGTGGCTCATGGCTCTCGGCCTGGCGCCGGTGTTGCTGGCCCTGGGCCTGCCGCTGA
GTCCCGCCGGCGCGCTGGCGAACCTGATCGCGGTGCCCTGTGTCGAGTTGCTGGTGGTGCCCCTGGCGCTGGTCGGCAGT
CTGCTGCTGTGGCTGCCGGTGGTGGGCGAGGGGCTGCTGTGGCTGGCGGGTGGCGTGCTCGACGTGCTGCTGGGCCTGCT
CGGGCGCCTGTCGCTGTATTCCCCGGCCTGGCACCCCATGGCGCCGCCGCCCTGGAGCATCGCCCTGGCCCTGTTCGGCG
CGCTGCTGTGCCTGGCGCCGGTCGGGCTGCCGCTGCGTCCGCTGGGCCTGGCGTTGCTGTTGCCGATGTTCTGGCCGCAT
TCCAGCGCGCCGCCCCATGGCCATGCCGAAGTGCGGGTGCTGGACGTGGGCCAGGGGCTGTCCGTGCTGATCCGCACCCG
CCAGCACACCTGGCTGTACGACGCCGGACCGCGCCGGGGCGATTTCGACCTCGGCGAGGTGGCGGTGCTGCCGACTCTCC
GTGGCCTGGGCATCGAGCGCCTGGATATGCTGCTGCTCAGCCACGCCGACAATGACCACGCCGGCGGCGCCCGCTCGGTG
GCGGCGGCCGTGCCGGTAGCGCGGATCATCAGCGGCGAGCCCGGGCGTTTGCCGGACAGCCTGCCTGCCGGCCCCTGCGG
CAACGAGGCATGGCAGCTGGACGGCGTGCGCTTCTCCACCTGGCAGTGGCCCGATGCGACGGACAGCAACGGCCGCTCCT
GTGTGCTGTACGTCGAGGCCGGCGGCGAGAGCCTGCTGCTCACCGGCGACCTGCCGGCCGCGGGCGAGGCCGCCTGGCTG
GCCAGCCATCCCGGGCTTGGCGCCGACTGGCTGCTGGCCGGCCACCATGGCAGCCGCAGCGCCTCTTCCGCGGCCTTCGT
CAGGCAACTGGCGCCCCGCGCGGCGCTGGTTTCCCGCTCGCGGCACAACGCCCATGGCCATCCGTCCAGCGAGGTATTGC
AACGCTTTGCCGAGCAGGGGACGAAGGTGCACGATGTGGCCCGGGAGGGCGCCCTGCGCCTGCTCCTGGGCCAGCGTGGA
ACGCTGCGCGGCGTGCGCGAAAATGCCGGATTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (495-677)

• Domain of unknown function (DUF4131) (DUF4131) (16-162)

• Competence protein (Competence) (195-458)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	57.361	97.959	0.562
comA	Ralstonia pseudosolanacearum GMI1000	35.31	100	0.365