Detailed information NTG0168265

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BSBS38_RS13825
• Genome accession: NZ_CP017314
• Coordinates: 2576440..2577045 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain BS38
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2571440..2582045

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSBS38_RS13795 (BSBS38_02780)	-	2572253..2572642 (+)	390	WP_014477528.1	TIGR04086 family membrane protein	-
BSBS38_RS13800 (BSBS38_02781)	yajC	2572699..2572965 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
BSBS38_RS13805 (BSBS38_02782)	tgt	2573002..2574147 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
BSBS38_RS13810 (BSBS38_02783)	queA	2574174..2575202 (-)	1029	WP_014477530.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BSBS38_RS13815 (BSBS38_02784)	yrzS	2575232..2575432 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
BSBS38_RS13820 (BSBS38_02785)	ruvB	2575425..2576429 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BSBS38_RS13825 (BSBS38_02786)	ruvA	2576440..2577045 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
BSBS38_RS13830 (BSBS38_02787)	bofC	2577184..2577696 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
BSBS38_RS13835 (BSBS38_02788)	csbX	2577744..2579051 (-)	1308	WP_014480439.1	MFS transporter	-
BSBS38_RS13840 (BSBS38_02789)	iolG	2579122..2580147 (-)	1026	WP_014480440.1	inositol 2-dehydrogenase	-
BSBS38_RS13845 (BSBS38_02790)	yrzF	2580385..2581032 (+)	648	WP_014480441.1	phosphotransferase	-
BSBS38_RS22010 (BSBS38_02791)	-	2581078..2581200 (-)	123	WP_003229707.1	hypothetical protein	-
BSBS38_RS22015 (BSBS38_02792)	-	2581405..2581731 (+)	327	WP_180995355.1	DUF5412 family protein	-
BSBS38_RS13860 (BSBS38_02793)	-	2581738..2581878 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=168265 BSBS38_RS13825 WP_003229717.1 2576440..2577045(-) (ruvA) [Bacillus subtilis strain BS38]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=168265 BSBS38_RS13825 WP_003229717.1 2576440..2577045(-) (ruvA) [Bacillus subtilis strain BS38]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408