Detailed information NTG0168219

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AL532_RS27415
• Genome accession: NZ_CP014062
• Coordinates: 5723029..5725242 (-)
• Length: 737 a.a.
• NCBI ID: WP_104835341.1
• Uniprot ID: -
• Organism: Pseudomonas monteilii strain FDAARGOS_171
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5718029..5730242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL532_RS27380 (AL532_27380)	murB	5718102..5719121 (-)	1020	WP_060498749.1	UDP-N-acetylmuramate dehydrogenase	-
AL532_RS27385 (AL532_27385)	-	5719118..5719582 (-)	465	WP_104835338.1	low molecular weight protein-tyrosine-phosphatase	-
AL532_RS27390 (AL532_27390)	kdsB	5719582..5720346 (-)	765	WP_060498747.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AL532_RS27395 (AL532_27395)	-	5720343..5720528 (-)	186	WP_003247142.1	Trm112 family protein	-
AL532_RS27400 (AL532_27400)	lpxK	5720573..5721574 (-)	1002	WP_104835339.1	tetraacyldisaccharide 4'-kinase	-
AL532_RS27405 (AL532_27405)	-	5721574..5722008 (-)	435	WP_104835340.1	biopolymer transporter ExbD	-
AL532_RS27410 (AL532_27410)	exbB	5722005..5722640 (-)	636	WP_016391244.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
AL532_RS27415 (AL532_27415)	comA	5723029..5725242 (-)	2214	WP_104835341.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AL532_RS27420 (AL532_27420)	-	5725385..5725891 (+)	507	Protein_5290	DUF2062 domain-containing protein	-
AL532_RS27425 (AL532_27425)	-	5725901..5726680 (-)	780	WP_060498742.1	ABC transporter permease	-
AL532_RS27430 (AL532_27430)	-	5726677..5727609 (-)	933	WP_016715124.1	ABC transporter ATP-binding protein	-
AL532_RS27435 (AL532_27435)	-	5727743..5728366 (-)	624	WP_104835342.1	glutathione S-transferase	-
AL532_RS27440 (AL532_27440)	-	5728518..5728928 (-)	411	WP_060498740.1	hypothetical protein	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 79352.31 Da
• Isoelectric Point: 10.6918

>NTDB_id=168219 AL532_RS27415 WP_104835341.1 5723029..5725242(-) (comA) [Pseudomonas monteilii strain FDAARGOS_171]
MRTGMFALALGLLCLGFLPALPSVGWLIALAACAVASLFTRVWPLGCFLLGLCWACGSAQLALDDRLAAGLDGRTVWLEG
RVVGLPVRTAQGVRFELDAARSRRAELPQRLQLSWFGGPPLRAGEQWRLAVTLQRPAGLSNPHGPDREAQLLARRVGATG
TVKAGQLLAPVTGGWRDALRQRLLAVEANGRTAALVALVLGDGAGLAREDWQTLQATGTVHLLVISGQHIGLVAGLLYGL
VAGLARWGWWPARLPWLPWACGLAMTAALAYAWLAGGGVPVQRACLMLAVVLLWRLRFRHLGALLPLLLALVVVLLVEPL
AALLPGFWLSFTAVATLLYCFSARLGGWRPWQAWTRAQWVIAIGLLPVLLATGLPVSLSAPLANLVAVPWISLVVLPLAL
LGTVLLPLPVVGEALLWLAGGLLDLLFRGLALVAQQRPAWMPAVLPVWAWLLVCVGALLVLLPRGVPLRGLGGVMLLALW
VPREPVPLGQVEVWQLDVGQGLAVLLRTRHHNLLYDAGPAKGDSDLGERVVLPTLRKLGVGGLDVMLVSHAHADHAGGAA
AIQRGLPVRRTIGGEALNDVPLQPCVSGERWDWDGVRFSLWRWADGQSSNDRSCVLMVEAQGERLLLAGDMEAGAERAWL
AAAETPRVDWLQSPHHGSRSSSSEAFIRATAPRGVLISRGRNNSFGHPHVQVVERYRRYGVTIHDTAVEGALRLVLGRQG
EVEGVRGQRRFWRAQLD

Nucleotide

• Length: 2214 bp

>NTDB_id=168219 AL532_RS27415 WP_104835341.1 5723029..5725242(-) (comA) [Pseudomonas monteilii strain FDAARGOS_171]
ATGCGCACAGGGATGTTTGCGCTCGCGCTCGGGCTGTTGTGCCTGGGCTTTCTCCCCGCATTGCCATCGGTCGGATGGTT
GATCGCGCTGGCGGCCTGCGCTGTCGCCAGTCTGTTCACCCGCGTGTGGCCGTTGGGCTGCTTTCTGCTGGGCCTGTGCT
GGGCTTGCGGGTCTGCTCAGCTGGCCCTTGATGATCGCCTGGCTGCCGGCCTGGATGGCCGCACCGTGTGGCTGGAAGGG
CGGGTGGTTGGCTTGCCGGTCCGAACGGCACAAGGCGTGCGTTTCGAGCTGGACGCGGCACGCTCGCGGCGGGCCGAACT
GCCGCAGCGCCTGCAACTGAGCTGGTTCGGTGGGCCGCCCCTGCGGGCGGGCGAGCAGTGGCGGCTGGCCGTGACCCTGC
AGCGCCCGGCCGGGCTGTCGAACCCGCATGGGCCAGACCGCGAGGCGCAACTGCTGGCACGGCGGGTGGGTGCCACGGGC
ACAGTCAAGGCGGGGCAGCTGCTGGCGCCAGTAACCGGTGGTTGGCGCGATGCGCTGCGTCAGCGCTTGCTCGCAGTCGA
GGCCAATGGCCGAACGGCGGCGTTGGTGGCGCTGGTGCTAGGTGATGGGGCGGGCCTGGCCCGGGAGGACTGGCAGACGT
TGCAGGCCACCGGCACGGTGCACCTGCTGGTGATTTCTGGCCAGCACATCGGCTTGGTCGCCGGTTTGCTGTATGGCCTG
GTTGCCGGGCTGGCACGTTGGGGTTGGTGGCCTGCACGGCTGCCCTGGTTGCCCTGGGCGTGTGGCTTGGCCATGACCGC
AGCACTGGCCTACGCTTGGCTGGCCGGTGGGGGCGTGCCGGTGCAGCGTGCCTGCCTGATGCTGGCCGTGGTGCTGCTCT
GGCGTCTGCGTTTTCGTCACCTCGGTGCATTGTTGCCGCTGTTGTTGGCGCTGGTCGTGGTGTTGCTAGTCGAACCGCTG
GCGGCATTGTTGCCGGGGTTCTGGCTGTCGTTTACCGCAGTCGCCACGCTTCTCTATTGCTTCAGTGCCCGGCTAGGGGG
CTGGCGGCCCTGGCAAGCCTGGACGCGGGCGCAATGGGTAATCGCTATCGGTTTGCTGCCAGTGTTGTTGGCCACTGGCC
TGCCGGTGAGCTTGAGTGCGCCGTTGGCCAATCTGGTAGCGGTGCCGTGGATCAGCCTGGTGGTGTTGCCGTTGGCGCTG
CTGGGCACGGTGCTGCTGCCATTGCCCGTGGTAGGGGAGGCGTTGTTATGGCTGGCGGGCGGGCTGCTGGACCTGTTGTT
CCGAGGGTTGGCGTTGGTGGCGCAACAGCGCCCGGCGTGGATGCCGGCGGTATTGCCAGTGTGGGCCTGGTTACTGGTTT
GCGTGGGGGCGCTGTTGGTGCTGCTGCCTCGGGGCGTGCCGTTGCGTGGTTTGGGGGGCGTGATGCTGTTGGCCCTGTGG
GTGCCGAGGGAGCCGGTGCCGCTTGGGCAGGTCGAAGTCTGGCAACTGGACGTCGGTCAAGGGCTGGCAGTGCTGTTGCG
CACGCGCCACCACAACCTGCTTTACGATGCCGGTCCGGCCAAGGGTGACAGTGACCTGGGCGAGCGGGTGGTGCTGCCGA
CCCTGCGCAAGCTGGGGGTGGGGGGCCTTGACGTGATGCTGGTCAGCCACGCCCATGCTGATCATGCGGGCGGCGCTGCC
GCCATCCAGCGAGGTCTGCCGGTGCGGCGGACAATCGGTGGGGAAGCGCTGAACGATGTTCCGTTGCAACCTTGTGTCAG
CGGCGAGCGATGGGACTGGGATGGCGTGCGATTTTCGCTATGGCGTTGGGCCGACGGACAGAGCAGCAATGACCGCTCGT
GCGTGCTGATGGTCGAGGCGCAGGGCGAGCGCTTGCTGCTGGCAGGGGATATGGAGGCCGGTGCCGAACGGGCCTGGCTG
GCGGCAGCCGAGACGCCGAGGGTCGACTGGTTGCAGTCGCCACACCATGGCAGCCGCAGCTCGTCCAGCGAGGCCTTCAT
CCGTGCCACGGCGCCGCGCGGGGTGCTGATTTCGCGGGGGCGCAACAATAGCTTCGGGCACCCGCATGTACAGGTGGTCG
AGCGCTATCGGCGGTATGGGGTGACGATACATGATACGGCGGTGGAGGGGGCGTTGCGGTTGGTGCTGGGGCGGCAGGGG
GAGGTTGAAGGTGTTCGGGGGCAGCGGCGGTTTTGGCGGGCTCAACTGGACTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-463)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-674)

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.028	97.693	0.577
comA	Ralstonia pseudosolanacearum GMI1000	36.154	100	0.383