Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AL464_RS07455 | Genome accession | NZ_CP014046 |
| Coordinates | 1440893..1441411 (+) | Length | 172 a.a. |
| NCBI ID | WP_005462534.1 | Uniprot ID | Q87LS4 |
| Organism | Vibrio parahaemolyticus strain ATCC 17802 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1435893..1446411
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL464_RS07445 (AL464_06915) | gshA | 1438628..1440196 (+) | 1569 | WP_029806072.1 | glutamate--cysteine ligase | - |
| AL464_RS07450 (AL464_06920) | - | 1440221..1440826 (+) | 606 | WP_015297256.1 | hypothetical protein | - |
| AL464_RS07455 (AL464_06925) | luxS | 1440893..1441411 (+) | 519 | WP_005462534.1 | S-ribosylhomocysteine lyase | Regulator |
| AL464_RS07460 (AL464_06930) | - | 1441472..1442752 (-) | 1281 | WP_005462557.1 | HlyC/CorC family transporter | - |
| AL464_RS07465 (AL464_06935) | - | 1442878..1443672 (-) | 795 | WP_005462565.1 | cytochrome C assembly family protein | - |
| AL464_RS07470 (AL464_06940) | ffh | 1443885..1445267 (+) | 1383 | WP_005462555.1 | signal recognition particle protein | - |
| AL464_RS07475 (AL464_06945) | rpsP | 1445477..1445725 (+) | 249 | WP_005379962.1 | 30S ribosomal protein S16 | - |
| AL464_RS07480 (AL464_06950) | rimM | 1445754..1446302 (+) | 549 | WP_005462552.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19033.73 Da Isoelectric Point: 4.7134
>NTDB_id=167977 AL464_RS07455 WP_005462534.1 1440893..1441411(+) (luxS) [Vibrio parahaemolyticus strain ATCC 17802]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
Nucleotide
Download Length: 519 bp
>NTDB_id=167977 AL464_RS07455 WP_005462534.1 1440893..1441411(+) (luxS) [Vibrio parahaemolyticus strain ATCC 17802]
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
88.889 |
99.419 |
0.884 |