Detailed information NTG0167622

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: A4W86_RS02215
• Genome accession: NZ_CP017272
• Coordinates: 476488..477489 (+)
• Length: 333 a.a.
• NCBI ID: WP_016264677.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.1239
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 471488..482489

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W86_RS02190 (A4W86_02175)	-	471736..472632 (-)	897	WP_016264673.1	DUF368 domain-containing protein	-
A4W86_RS02195 (A4W86_02180)	-	472657..473544 (-)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
A4W86_RS02200 (A4W86_02185)	-	473702..474136 (+)	435	WP_016264674.1	DUF948 domain-containing protein	-
A4W86_RS02205 (A4W86_02190)	-	474142..474579 (+)	438	WP_251950857.1	YtxH domain-containing protein	-
A4W86_RS02210 (A4W86_02195)	-	475174..476271 (-)	1098	WP_016264676.1	Xaa-Pro peptidase family protein	-
A4W86_RS02215 (A4W86_02200)	ccpA	476488..477489 (+)	1002	WP_016264677.1	catabolite control protein A	Regulator
A4W86_RS02220 (A4W86_02205)	-	477537..480092 (-)	2556	WP_251950858.1	transglycosylase domain-containing protein	-
A4W86_RS02225 (A4W86_02210)	-	480376..481083 (+)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
A4W86_RS02230 (A4W86_02215)	-	481259..481963 (-)	705	WP_251950859.1	DUF4811 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36333.50 Da
• Isoelectric Point: 4.7948

>NTDB_id=167622 A4W86_RS02215 WP_016264677.1 476488..477489(+) (ccpA) [Latilactobacillus sakei strain TMW 1.1239]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDALNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=167622 A4W86_RS02215 WP_016264677.1 476488..477489(+) (ccpA) [Latilactobacillus sakei strain TMW 1.1239]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACTGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAACGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCCACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTGGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATGCCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGGGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGCAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGGATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGCATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.31	98.799	0.616
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.486	98.799	0.598
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.456	100	0.565