Detailed information NTG0167543

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: BHU02_RS02395
• Genome accession: NZ_CP017271
• Coordinates: 502440..503441 (+)
• Length: 333 a.a.
• NCBI ID: WP_016264677.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei subsp. sakei strain TMW 1.1189
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 497440..508441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BHU02_RS02370 (BHU02_02320)	-	497689..498585 (-)	897	WP_016264673.1	DUF368 domain-containing protein	-
BHU02_RS02375 (BHU02_02325)	-	498610..499497 (-)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
BHU02_RS02380 (BHU02_02330)	-	499655..500089 (+)	435	WP_016264674.1	DUF948 domain-containing protein	-
BHU02_RS02385 (BHU02_02335)	-	500095..500532 (+)	438	WP_016264675.1	YtxH domain-containing protein	-
BHU02_RS02390 (BHU02_02340)	-	501126..502223 (-)	1098	WP_016264676.1	Xaa-Pro peptidase family protein	-
BHU02_RS02395 (BHU02_02345)	ccpA	502440..503441 (+)	1002	WP_016264677.1	catabolite control protein A	Regulator
BHU02_RS02400 (BHU02_02350)	-	503489..506044 (-)	2556	WP_035147028.1	transglycosylase domain-containing protein	-
BHU02_RS02405 (BHU02_02355)	-	506328..507035 (+)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
BHU02_RS02410 (BHU02_02360)	-	507241..507945 (-)	705	WP_016264680.1	DUF4811 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36333.50 Da
• Isoelectric Point: 4.7948

>NTDB_id=167543 BHU02_RS02395 WP_016264677.1 502440..503441(+) (ccpA) [Latilactobacillus sakei subsp. sakei strain TMW 1.1189]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDALNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=167543 BHU02_RS02395 WP_016264677.1 502440..503441(+) (ccpA) [Latilactobacillus sakei subsp. sakei strain TMW 1.1189]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACTGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAACGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCCACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTAGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATGCCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGGGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGTAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGGATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGTATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.31	98.799	0.616
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.486	98.799	0.598
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.456	100	0.565