Detailed information NTG0166468

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AUL54_RS08835
• Genome accession: NZ_CP013950
• Coordinates: 1857336..1858484 (-)
• Length: 382 a.a.
• NCBI ID: WP_045926250.1
• Uniprot ID: -
• Organism: Bacillus sp. SDLI1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1852336..1863484

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AUL54_RS08810 (AUL54_08815)	-	1852474..1853232 (-)	759	WP_047476235.1	ABC transporter ATP-binding protein	-
AUL54_RS08815 (AUL54_08820)	-	1853226..1854173 (-)	948	WP_045926247.1	iron chelate uptake ABC transporter family permease subunit	-
AUL54_RS08820 (AUL54_08825)	ceuB	1854163..1855116 (-)	954	WP_060963606.1	ABC transporter permease	Machinery gene
AUL54_RS08825 (AUL54_08830)	-	1855532..1856896 (+)	1365	WP_060963607.1	aspartate kinase	-
AUL54_RS20670	-	1856992..1857090 (+)	99	WP_016937260.1	YjcZ family sporulation protein	-
AUL54_RS08830 (AUL54_08835)	phrC	1857233..1857352 (-)	120	WP_016937261.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AUL54_RS08835 (AUL54_08840)	rapC	1857336..1858484 (-)	1149	WP_045926250.1	tetratricopeptide repeat protein	Regulator
AUL54_RS08840 (AUL54_08845)	-	1858638..1860071 (-)	1434	WP_162492439.1	HAMP domain-containing sensor histidine kinase	-
AUL54_RS08845 (AUL54_08850)	-	1860058..1860741 (-)	684	WP_060963609.1	response regulator transcription factor	-
AUL54_RS08850 (AUL54_08855)	-	1860954..1862396 (+)	1443	WP_060963610.1	ABC transporter permease	-
AUL54_RS08855 (AUL54_08860)	-	1862411..1863094 (+)	684	WP_060963611.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45561.76 Da
• Isoelectric Point: 5.0674

>NTDB_id=166468 AUL54_RS08835 WP_045926250.1 1857336..1858484(-) (rapC) [Bacillus sp. SDLI1]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRTD
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKDKASEYHRRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLENKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=166468 AUL54_RS08835 WP_045926250.1 1857336..1858484(-) (rapC) [Bacillus sp. SDLI1]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAGATTAACGAGTGGTATCGATACATAAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTGGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGGCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATTACGTATTATAAACAGGCTGAGAAAAAATTGGCCT
TCGTATCGGACCACGTGGAGCGGGCAGAGTTTTATTTTAAGGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAGAATGCTTATGAAATTTACGTAGAGCAGGACACATACAACGTCCGGATCATTCAATGCCATTT
TGTGTTCGGCGTCAATTTAATGGATGAAAGACGTTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCTG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCACCGAC
GAAGCGATTCCTTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGATAAAGCGTCGGAATATCACAGGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAGAATAAAAATTTGTACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.984	100	0.83
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571