Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | A7J08_RS07655 | Genome accession | NZ_CP017088 |
| Coordinates | 1533127..1533777 (-) | Length | 216 a.a. |
| NCBI ID | WP_023371212.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain SRD478 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1528127..1538777
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7J08_RS07640 (A7J08_07430) | - | 1529624..1530532 (+) | 909 | WP_024409922.1 | neutral zinc metallopeptidase | - |
| A7J08_RS07645 (A7J08_07435) | - | 1530741..1531292 (-) | 552 | WP_024409923.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| A7J08_RS07650 (A7J08_07440) | - | 1531737..1533125 (-) | 1389 | WP_024409924.1 | HAMP domain-containing sensor histidine kinase | - |
| A7J08_RS07655 (A7J08_07445) | scnR | 1533127..1533777 (-) | 651 | WP_023371212.1 | response regulator transcription factor | Regulator |
| A7J08_RS07660 (A7J08_07450) | - | 1534009..1534710 (+) | 702 | WP_024382375.1 | CPBP family intramembrane glutamic endopeptidase | - |
| A7J08_RS07665 (A7J08_07455) | - | 1535175..1538294 (-) | 3120 | WP_228475726.1 | serum opacification factor | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 24742.85 Da Isoelectric Point: 4.7792
>NTDB_id=166046 A7J08_RS07655 WP_023371212.1 1533127..1533777(-) (scnR) [Streptococcus suis strain SRD478]
MSRILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLEVLKEIRKTSQIPILMLTA
MGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGDTDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLA
KRRGKIVSRDNLMMGIWGYTELDSRVLDNHIKNIRKKLPSLPLKTVVGRGYQIEDT
MSRILVVEDDIVISQVVCEFLKEHGYQVESVFDGKVALERFQEEQFDLIVLDIMIPSMTGLEVLKEIRKTSQIPILMLTA
MGDEYTQLISFNQIISDYVVKPFSPTILVKRIENILRGKGDTDSIEIGTILIQPTSGAVYMEEEEVQLTKKEYEVLLYLA
KRRGKIVSRDNLMMGIWGYTELDSRVLDNHIKNIRKKLPSLPLKTVVGRGYQIEDT
Nucleotide
Download Length: 651 bp
>NTDB_id=166046 A7J08_RS07655 WP_023371212.1 1533127..1533777(-) (scnR) [Streptococcus suis strain SRD478]
ATGTCAAGGATCTTGGTTGTCGAGGATGACATAGTTATTAGTCAAGTTGTTTGTGAGTTTTTAAAAGAACATGGTTATCA
GGTAGAATCTGTTTTTGATGGAAAGGTTGCTTTAGAAAGGTTTCAAGAAGAACAATTCGATTTAATTGTTTTAGATATCA
TGATTCCGTCTATGACAGGTTTGGAAGTACTGAAGGAAATTCGCAAAACTTCTCAGATTCCAATTTTGATGCTGACAGCC
ATGGGTGACGAATATACACAGCTTATTAGTTTTAATCAGATTATAAGTGATTATGTTGTTAAACCATTTTCACCAACTAT
ATTGGTAAAACGGATTGAGAATATTTTGAGAGGAAAAGGAGATACAGATAGCATTGAGATAGGAACAATTCTTATTCAAC
CAACTAGCGGGGCAGTTTATATGGAAGAAGAAGAAGTTCAATTGACGAAAAAAGAATATGAAGTTTTACTATATTTAGCT
AAACGACGTGGGAAAATTGTTAGTCGTGATAACTTGATGATGGGAATATGGGGATATACGGAATTGGATAGTCGTGTCTT
AGATAATCATATCAAGAATATCCGTAAGAAATTGCCGTCACTTCCTTTGAAGACAGTAGTTGGTCGTGGTTATCAAATAG
AGGATACTTGA
ATGTCAAGGATCTTGGTTGTCGAGGATGACATAGTTATTAGTCAAGTTGTTTGTGAGTTTTTAAAAGAACATGGTTATCA
GGTAGAATCTGTTTTTGATGGAAAGGTTGCTTTAGAAAGGTTTCAAGAAGAACAATTCGATTTAATTGTTTTAGATATCA
TGATTCCGTCTATGACAGGTTTGGAAGTACTGAAGGAAATTCGCAAAACTTCTCAGATTCCAATTTTGATGCTGACAGCC
ATGGGTGACGAATATACACAGCTTATTAGTTTTAATCAGATTATAAGTGATTATGTTGTTAAACCATTTTCACCAACTAT
ATTGGTAAAACGGATTGAGAATATTTTGAGAGGAAAAGGAGATACAGATAGCATTGAGATAGGAACAATTCTTATTCAAC
CAACTAGCGGGGCAGTTTATATGGAAGAAGAAGAAGTTCAATTGACGAAAAAAGAATATGAAGTTTTACTATATTTAGCT
AAACGACGTGGGAAAATTGTTAGTCGTGATAACTTGATGATGGGAATATGGGGATATACGGAATTGGATAGTCGTGTCTT
AGATAATCATATCAAGAATATCCGTAAGAAATTGCCGTCACTTCCTTTGAAGACAGTAGTTGGTCGTGGTTATCAAATAG
AGGATACTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
37.838 |
100 |
0.389 |
| micA | Streptococcus pneumoniae Cp1015 |
36.889 |
100 |
0.384 |
| vicR | Streptococcus mutans UA159 |
36.283 |
100 |
0.38 |