Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | AVR58_RS04700 | Genome accession | NZ_CP013742 |
| Coordinates | 1014667..1015266 (+) | Length | 199 a.a. |
| NCBI ID | WP_014841277.1 | Uniprot ID | A0AAV2UVV9 |
| Organism | Legionella pneumophila strain Philadelphia-1 isolate AE | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1009667..1020266
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVR58_RS04685 (AVR58_04560) | ravI | 1011610..1012620 (-) | 1011 | WP_010946661.1 | Dot/Icm T4SS effector RavI | - |
| AVR58_RS04690 (AVR58_04565) | pilM | 1013037..1014101 (+) | 1065 | WP_010946662.1 | type IV pilus assembly protein PilM | Machinery gene |
| AVR58_RS04695 (AVR58_04570) | pilN | 1014105..1014653 (+) | 549 | WP_010946663.1 | PilN domain-containing protein | Machinery gene |
| AVR58_RS04700 (AVR58_04575) | pilO | 1014667..1015266 (+) | 600 | WP_014841277.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AVR58_RS04705 (AVR58_04580) | pilP | 1015263..1015850 (+) | 588 | WP_010946665.1 | pilus assembly protein PilP | Machinery gene |
| AVR58_RS04710 (AVR58_04585) | pilQ | 1015854..1017950 (+) | 2097 | WP_010946666.1 | type IV pilus secretin PilQ | Machinery gene |
| AVR58_RS04715 (AVR58_04590) | aroK | 1018396..1018923 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| AVR58_RS04720 (AVR58_04595) | aroB | 1018910..1020019 (+) | 1110 | WP_010946668.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22496.21 Da Isoelectric Point: 5.3369
>NTDB_id=164603 AVR58_RS04700 WP_014841277.1 1014667..1015266(+) (pilO) [Legionella pneumophila strain Philadelphia-1 isolate AE]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=164603 AVR58_RS04700 WP_014841277.1 1014667..1015266(+) (pilO) [Legionella pneumophila strain Philadelphia-1 isolate AE]
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGGTATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGAGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGGTATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTAGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGAGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
99.497 |
100 |
0.995 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
37.696 |
95.98 |
0.362 |