Detailed information NTG0164486

Bioinformatically predicted

Overview

• Name: comQ
• Type: Regulator
• Locus tag: AVM03_RS09230
• Genome accession: NZ_CP013727
• Coordinates: 1976148..1977080 (-)
• Length: 310 a.a.
• NCBI ID: WP_025650217.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain MBE1283
• Function: modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1971148..1982080

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVM03_RS09195 (AVM03_09185)	-	1971404..1971880 (+)	477	WP_003152059.1	Na+/H+ antiporter subunit E	-
AVM03_RS09200 (AVM03_09190)	-	1971880..1972164 (+)	285	WP_003152057.1	Na(+)/H(+) antiporter subunit F1	-
AVM03_RS09205 (AVM03_09195)	mnhG	1972148..1972522 (+)	375	WP_003152056.1	monovalent cation/H(+) antiporter subunit G	-
AVM03_RS09210 (AVM03_09200)	-	1972562..1972945 (-)	384	WP_003152054.1	hotdog fold thioesterase	-
AVM03_RS09215 (AVM03_09205)	comA	1972967..1973611 (-)	645	WP_003152052.1	response regulator transcription factor	Regulator
AVM03_RS09220 (AVM03_09210)	comP	1973692..1975995 (-)	2304	WP_003152050.1	sensor histidine kinase	Regulator
AVM03_RS09230 (AVM03_09220)	comQ	1976148..1977080 (-)	933	WP_025650217.1	class 1 isoprenoid biosynthesis enzyme	Regulator
AVM03_RS09235 (AVM03_09225)	degQ	1977265..1977405 (-)	141	WP_003152043.1	degradation enzyme regulation protein DegQ	Regulator
AVM03_RS09245 (AVM03_09235)	-	1977871..1978212 (+)	342	WP_014305721.1	hypothetical protein	-
AVM03_RS09250 (AVM03_09240)	-	1978219..1979439 (-)	1221	WP_003152038.1	EAL and HDOD domain-containing protein	-
AVM03_RS09255 (AVM03_09245)	-	1979569..1981035 (-)	1467	WP_014305722.1	nicotinate phosphoribosyltransferase	-
AVM03_RS09260 (AVM03_09250)	-	1981053..1981604 (-)	552	WP_003152033.1	cysteine hydrolase family protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35663.80 Da
• Isoelectric Point: 5.4532

>NTDB_id=164486 AVM03_RS09230 WP_025650217.1 1976148..1977080(-) (comQ) [Bacillus amyloliquefaciens strain MBE1283]
MKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLRIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELS

Nucleotide

• Length: 933 bp

>NTDB_id=164486 AVM03_RS09230 WP_025650217.1 1976148..1977080(-) (comQ) [Bacillus amyloliquefaciens strain MBE1283]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAGTGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAGAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGG
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCTGA

Domains

Predicted by InterproScan.

• Polyprenyl synthetase (polyprenyl_synt) (41-227)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Bacillus subtilis subsp. subtilis str. 168	61.246	93.226	0.571