Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AT706_RS02890 Genome accession   NZ_CP013654
Coordinates   577915..580215 (+) Length   766 a.a.
NCBI ID   WP_046340263.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BSD-2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 572915..585215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT706_RS02865 (AT706_02865) pdeH 574506..575735 (+) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  AT706_RS02870 (AT706_02870) - 575711..576079 (-) 369 WP_015483634.1 hypothetical protein -
  AT706_RS21535 - 576257..576319 (-) 63 Protein_572 hypothetical protein -
  AT706_RS02875 (AT706_02875) degQ 576541..576681 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AT706_RS02880 (AT706_02880) - 576866..577726 (+) 861 WP_015483633.1 polyprenyl synthetase family protein -
  AT706_RS02885 (AT706_02885) comX 577739..577903 (+) 165 WP_015384519.1 competence pheromone ComX -
  AT706_RS02890 (AT706_02890) comP 577915..580215 (+) 2301 WP_046340263.1 histidine kinase Regulator
  AT706_RS02895 (AT706_02895) comA 580296..580940 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  AT706_RS02900 (AT706_02900) yuxO 580958..581338 (+) 381 WP_015483631.1 hotdog fold thioesterase -
  AT706_RS02905 (AT706_02905) mnhG 581377..581751 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  AT706_RS02910 (AT706_02910) mrpF 581735..582019 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  AT706_RS02915 (AT706_02915) mrpE 582019..582495 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  AT706_RS02920 (AT706_02920) mrpD 582501..583982 (-) 1482 WP_015384516.1 Na+/H+ antiporter subunit D -
  AT706_RS02925 (AT706_02925) mrpC 583975..584316 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  AT706_RS02930 (AT706_02930) mrpB 584316..584747 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88455.64 Da        Isoelectric Point: 8.0572

>NTDB_id=163501 AT706_RS02890 WP_046340263.1 577915..580215(+) (comP) [Bacillus subtilis subsp. subtilis strain BSD-2]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGVLALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFKFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLIQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYQKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=163501 AT706_RS02890 WP_046340263.1 577915..580215(+) (comP) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCTGAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATTAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAGAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTTAACTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTTGGCACTGTGTTATTTAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTCTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGCAGGTTAAAATATTATGGAGTATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAGGAAGTACTTGATTTCAAATTTAGATTAAAAAGAGTTTCGGAAAAATTTAATTATCAA
GACAGTATATATAAATTTACGCAGCTGATTAGAGATTCAACTTCTTTGATCCAAGTATTTGAGGAACTGAAAACTACAAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAAATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTATACGATC
GAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATCTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACTGGGAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTTAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGGTTT
GATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.781

100

0.591


Multiple sequence alignment