Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   ATM98_RS04145 Genome accession   NZ_CP013651
Coordinates   847775..848779 (-) Length   334 a.a.
NCBI ID   WP_006595886.1    Uniprot ID   A0A127TTE3
Organism   Streptococcus sp. A12     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 842775..853779
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ATM98_RS04130 (ATM98_04130) thrS 843030..844973 (-) 1944 WP_061564208.1 threonine--tRNA ligase -
  ATM98_RS04135 (ATM98_04135) - 845357..846679 (-) 1323 WP_061564209.1 glycosyltransferase family 4 protein -
  ATM98_RS04140 (ATM98_04140) - 846681..847679 (-) 999 WP_006597024.1 glycosyltransferase -
  ATM98_RS04145 (ATM98_04145) ccpA 847775..848779 (-) 1005 WP_006595886.1 catabolite control protein A Regulator
  ATM98_RS04150 (ATM98_04150) - 848940..850022 (+) 1083 WP_061564210.1 Xaa-Pro peptidase family protein -
  ATM98_RS04155 (ATM98_04155) - 850116..850385 (+) 270 WP_237367533.1 cytochrome O ubiquinol oxidase -
  ATM98_RS04160 (ATM98_04160) - 850758..851207 (-) 450 WP_061564212.1 Rrf2 family transcriptional regulator -
  ATM98_RS04165 (ATM98_04165) - 851351..852193 (-) 843 WP_061564213.1 metallophosphoesterase family protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37005.12 Da        Isoelectric Point: 6.6646

>NTDB_id=163404 ATM98_RS04145 WP_006595886.1 847775..848779(-) (ccpA) [Streptococcus sp. A12]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTLLAKRNKKIAFVSGPLVDDINGKIRLAGYKDALKAKKLSYSEGLVFESKYRYEEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLADQGVNVPEDFELITSDDSQITRYTRPNLSTVGQPLYDLGAISMRMLTKIMHKEELEEREV
LLAHTINHRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=163404 ATM98_RS04145 WP_006595886.1 847775..848779(-) (ccpA) [Streptococcus sp. A12]
ATGAATACAGACGATACTGTAACCATTTACGACGTTGCCCGAGAGGCGGGTGTCTCAATGGCGACTGTTAGCCGTGTCGT
GAACGGAAATAAGAACGTTAAGGAAAATACTCGTAAAAAAGTATTGGAAGTCATTGAACGTTTGGACTATCGTCCGAATG
CAGTAGCTCGTGGACTTGCGAGTAAGAAAACCACAACGGTAGGTGTTGTGATTCCAAATATTACCAATAGTTATTTCTCT
ACTCTGGCAAAGGGGATCGATGATATTGCTGAAATGTACAAGTACAACATCGTCCTTGCCAACAGCGATGAAGACGATGA
TAAAGAAGTTTCTGTTGTCAATACTCTTTTCTCAAAACAGGTCGATGGGATTATCTTCATGGGTTATCACTTGACAGAAA
AGATTCGTTCAGAATTCTCTCGTTCTCGGACACCGGTGGTCCTTGCTGGGACAGTTGATGTCGAACATCAATTGCCAAGT
GTCAATATCGACTACAAGCAAGCGACAGTAGACGCGGTTACACTATTGGCTAAACGAAATAAAAAGATTGCTTTTGTAAG
TGGACCATTAGTAGATGATATCAACGGTAAGATTCGCTTGGCTGGCTACAAAGATGCTTTGAAAGCAAAAAAATTGTCTT
ACAGTGAAGGCTTGGTCTTTGAGTCTAAGTACCGCTATGAAGAAGGCTATAACTTGGCTGAACGCATCATTGCATCTAAA
GCAACAGCAGCCTTTGTAACTGGGGATGAATTGGCAGCAGGTTTGCTTAATGGTCTAGCTGATCAAGGTGTGAACGTACC
GGAAGATTTTGAGTTAATTACCAGTGATGATTCACAAATTACACGCTACACTCGTCCAAACCTTTCAACTGTTGGCCAAC
CACTTTATGATTTGGGGGCTATCAGTATGCGGATGTTGACAAAAATTATGCATAAGGAAGAATTGGAAGAAAGAGAAGTT
CTTCTTGCCCATACCATCAATCATCGTGGAACTACGAAGAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A127TTE3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.018

100

0.91
  ccpA Streptococcus pneumoniae D39

85.03

100

0.85
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.1

99.102

0.566

Multiple sequence alignment