Detailed information NTG0163398

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ATM98_RS02705
• Genome accession: NZ_CP013651
• Coordinates: 531743..532975 (-)
• Length: 410 a.a.
• NCBI ID: WP_048691279.1
• Uniprot ID: -
• Organism: Streptococcus sp. A12
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 526743..537975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATM98_RS02675 (ATM98_02675)	-	527266..527718 (-)	453	WP_061564002.1	hypothetical protein	-
ATM98_RS02680 (ATM98_02680)	rplL	528123..528491 (-)	369	WP_061564003.1	50S ribosomal protein L7/L12	-
ATM98_RS02685 (ATM98_02685)	rplJ	528568..529068 (-)	501	WP_012000594.1	50S ribosomal protein L10	-
ATM98_RS02690 (ATM98_02690)	-	529303..530100 (-)	798	WP_048788792.1	formate/nitrite transporter family protein	-
ATM98_RS02695 (ATM98_02695)	-	530290..530958 (-)	669	WP_237367532.1	glucosaminidase domain-containing protein	-
ATM98_RS02700 (ATM98_02700)	yihA	531135..531731 (-)	597	WP_061564005.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
ATM98_RS02705 (ATM98_02705)	clpX	531743..532975 (-)	1233	WP_048691279.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ATM98_RS09640	-	533009..533182 (-)	174	WP_048691280.1	hypothetical protein	-
ATM98_RS02710 (ATM98_02710)	-	533186..533698 (-)	513	WP_061564006.1	dihydrofolate reductase	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45508.97 Da
• Isoelectric Point: 4.3462

>NTDB_id=163398 ATM98_RS02705 WP_048691279.1 531743..532975(-) (clpX) [Streptococcus sp. A12]
MPTNQSNDMMVYCSFCGKNQDEVQKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHENREEDNDVDLQKSNILMVGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNKAIDESSSYMQEIIAEDIQKFGIIPELIGRLPVLAALEQLTVDDLVR
ILKEPKNALVKQYQALLSFDDVELEFDDEALEEIASKAIERKTGARGLRSIIEETMLDVMFEVPSQEDVKLVRITKEAVN
GTEKPILETA

Nucleotide

• Length: 1233 bp

>NTDB_id=163398 ATM98_RS02705 WP_048691279.1 531743..532975(-) (clpX) [Streptococcus sp. A12]
ATGCCTACAAATCAATCAAATGATATGATGGTTTATTGTTCGTTTTGTGGTAAGAACCAAGACGAAGTACAGAAGATTAT
CGCAGGGAACAACGCCTTTATCTGTAATGAGTGTGTTGAGTTAGCTCAAGAAATCATTCGAGAAGAACTAGCTGAGGAAG
TCTTGGCAGACCTCTCAGAGGTTCCAAAACCAATCGAACTCCTCAATATCCTTAACCACTATGTTATCGGTCAGGATCGT
GCTAAACGAGCACTAGCAGTAGCAGTGTATAATCACTACAAACGAATTAACTTCCACGAAAATCGTGAAGAAGACAATGA
TGTAGATCTCCAAAAATCAAACATTTTGATGGTGGGGCCTACAGGTTCAGGAAAAACTTTCTTGGCTCAAACTCTTGCTA
AGAGCTTGAATGTTCCATTTGCCATTGCGGACGCGACAGCCTTGACAGAAGCGGGTTACGTCGGAGAAGATGTTGAAAAC
ATTCTTCTTAAGCTCTTGCAAGCTGCTGACTTCAATATTGAACGTGCAGAACGTGGCATCATCTATGTTGATGAAATCGA
TAAGATTGCTAAGAAGAGTGAGAACGTCTCTATCACCCGCGATGTATCTGGTGAAGGGGTACAACAAGCCCTCTTGAAGA
TTATCGAAGGAACTGTAGCCAGCGTGCCACCTCAAGGCGGACGCAAGCACCCACAACAAGAAATGATCCAAGTCGATACC
AAGAACATCCTCTTCATCGTCGGTGGAGCCTTTGATGGGATTGAAGAAATCGTGAAGCAACGTTTAGGTGAGAAGATCAT
TGGATTTGGTCAAAACAACAAAGCCATCGATGAATCAAGCTCTTATATGCAAGAAATCATTGCAGAAGATATCCAAAAAT
TCGGTATTATCCCTGAGTTAATCGGTCGGCTTCCAGTTCTTGCTGCATTAGAGCAATTGACAGTGGATGACTTGGTTCGT
ATTTTGAAAGAACCAAAAAACGCCTTGGTGAAACAATACCAAGCTCTCTTATCCTTTGACGACGTAGAATTGGAATTTGA
TGACGAAGCACTTGAAGAAATTGCAAGCAAAGCTATTGAACGCAAAACAGGTGCTCGTGGATTACGCTCCATCATCGAAG
AAACTATGTTGGATGTGATGTTTGAAGTTCCAAGTCAAGAAGATGTCAAATTGGTTCGAATCACCAAAGAAGCAGTTAAC
GGAACTGAAAAACCAATTTTAGAAACTGCCTAG

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (313-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	87.561	100	0.876
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.96	98.049	0.568