Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   HSISS4_RS00965 Genome accession   NZ_CP013216
Coordinates   181287..182549 (+) Length   420 a.a.
NCBI ID   WP_021143498.1    Uniprot ID   -
Organism   Streptococcus salivarius strain HSISS4     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 176287..187549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HSISS4_RS00940 (HSISS4_00146) - 176672..178249 (+) 1578 WP_021143494.1 ATP-binding cassette domain-containing protein -
  HSISS4_RS00945 (HSISS4_00147) - 178405..179121 (+) 717 WP_002883635.1 YebC/PmpR family DNA-binding transcriptional regulator -
  HSISS4_RS00950 (HSISS4_00148) - 179247..179585 (+) 339 WP_002883701.1 preprotein translocase subunit YajC -
  HSISS4_RS00955 (HSISS4_00149) - 179714..180463 (+) 750 WP_021143496.1 isoprenyl transferase -
  HSISS4_RS00960 (HSISS4_00150) - 180476..181270 (+) 795 WP_021143497.1 phosphatidate cytidylyltransferase -
  HSISS4_RS00965 (HSISS4_00151) eeP 181287..182549 (+) 1263 WP_021143498.1 RIP metalloprotease RseP Regulator
  HSISS4_RS00970 (HSISS4_00152) - 182620..184482 (+) 1863 WP_134954484.1 proline--tRNA ligase -
  HSISS4_RS00975 (HSISS4_00153) - 185089..187029 (+) 1941 WP_021143500.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45836.21 Da        Isoelectric Point: 5.8010

>NTDB_id=160688 HSISS4_RS00965 WP_021143498.1 181287..182549(+) (eeP) [Streptococcus salivarius strain HSISS4]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDISTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEETISVKPQENQGSYFLGVSPALKTSLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=160688 HSISS4_RS00965 WP_021143498.1 181287..182549(+) (eeP) [Streptococcus salivarius strain HSISS4]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGTCATTTCTTTTTCGCCAA
ACGCTCAGGAATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACATACAGGTAAGGATGGTACCG
TTTATACTATCCGTATCCTCCCTTTGGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTCACTGCCTATGATTTGGAAGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGATCATGATGCCACTATCGTTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCAAGCATTTGGGGACGTTTAATTACCAACTTTGCTGGTCCTATGAATAACTTCATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAAGGTGGTGTTCAAGATATATCGACCAACCGTATCCAGGTAGCCGATGGAGGCGCTGCTC
AGGTGGCAGGATTGAAAAATGGTGATGCCATCGAGGCTATCAATAAGGACAAGGTTACTGATTGGGACAGCTTGAAGGAA
GCATTGACAGAGAATACCCAAAAATTCTCCAAAGGTGACAGCCTTTCTGTGACAGTTAAGAGAAGTAACGGTCAGGAAGA
AACAATCTCTGTTAAACCTCAGGAGAACCAAGGTAGCTATTTTTTGGGTGTTTCTCCTGCTTTAAAAACAAGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTAGCACTTAAGGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCCCAGGCTTCAGAAAATGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACTTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTCACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(6-406)

(205-272)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95.238

100

0.952

  eeP Streptococcus thermophilus LMG 18311

95

100

0.95


Multiple sequence alignment