Detailed information NTG0160232

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ASU36_RS05445
• Genome accession: NZ_CP013137
• Coordinates: 1094858..1095169 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain XQ
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1089858..1100169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASU36_RS05410 (ASU36_05410)	gcvPA	1090360..1091706 (-)	1347	WP_000019687.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
ASU36_RS05415 (ASU36_05415)	gcvT	1091726..1092817 (-)	1092	WP_000093354.1	glycine cleavage system aminomethyltransferase GcvT	-
ASU36_RS05420 (ASU36_05420)	-	1092976..1093500 (-)	525	WP_001015120.1	shikimate kinase	-
ASU36_RS05425 (ASU36_05425)	-	1093490..1093636 (-)	147	WP_001789879.1	hypothetical protein	-
ASU36_RS05430 (ASU36_05430)	comGF	1093733..1094230 (-)	498	WP_001825340.1	competence type IV pilus minor pilin ComGF	Machinery gene
ASU36_RS05435 (ASU36_05435)	comGE	1094148..1094447 (-)	300	WP_000844415.1	hypothetical protein	Machinery gene
ASU36_RS05440 (ASU36_05440)	comGD	1094434..1094880 (-)	447	WP_072357807.1	competence type IV pilus minor pilin ComGD	Machinery gene
ASU36_RS05445 (ASU36_05445)	comGC	1094858..1095169 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ASU36_RS05450 (ASU36_05450)	comGB	1095183..1096253 (-)	1071	WP_000776413.1	competence type IV pilus assembly protein ComGB	Machinery gene
ASU36_RS05455 (ASU36_05455)	comGA	1096225..1097199 (-)	975	WP_058008079.1	competence type IV pilus ATPase ComGA	Machinery gene
ASU36_RS05460 (ASU36_05460)	-	1097251..1097874 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ASU36_RS05465 (ASU36_05465)	-	1097871..1098200 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ASU36_RS05470 (ASU36_05470)	-	1098200..1099186 (-)	987	WP_000161315.1	ROK family glucokinase	-
ASU36_RS05475 (ASU36_05475)	-	1099183..1099386 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=160232 ASU36_RS05445 WP_000472256.1 1094858..1095169(-) (comGC) [Staphylococcus aureus strain XQ]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=160232 ASU36_RS05445 WP_000472256.1 1094858..1095169(-) (comGC) [Staphylococcus aureus strain XQ]
ATGTTTAAATTTCTAAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369