Detailed information NTG0158170

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: APV63_RS01675
• Genome accession: NZ_CP012905
• Coordinates: 341655..342455 (+)
• Length: 266 a.a.
• NCBI ID: WP_060472955.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 7C
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 336655..347455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APV63_RS01640 (APV63_01640)	pseH	337154..337696 (+)	543	WP_060472951.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
APV63_RS01645 (APV63_01645)	-	337629..338567 (-)	939	WP_060472952.1	tetraacyldisaccharide 4'-kinase	-
APV63_RS01650 (APV63_01650)	-	338564..339346 (-)	783	WP_060472953.1	NAD+ synthase	-
APV63_RS01660 (APV63_01660)	ilvC	339595..340587 (+)	993	WP_060472954.1	ketol-acid reductoisomerase	-
APV63_RS01665 (APV63_01665)	minD	340612..341418 (+)	807	WP_001019048.1	septum site-determining protein MinD	-
APV63_RS01670 (APV63_01670)	minE	341415..341648 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
APV63_RS01675 (APV63_01675)	dprA	341655..342455 (+)	801	WP_060472955.1	DNA-processing protein DprA	Machinery gene
APV63_RS01680 (APV63_01680)	dprB	342452..342856 (+)	405	WP_060472956.1	Holliday junction resolvase RuvX	Machinery gene
APV63_RS01685 (APV63_01685)	-	342915..343562 (+)	648	WP_060472957.1	tetratricopeptide repeat protein	-
APV63_RS01690 (APV63_01690)	-	343749..344087 (+)	339	WP_060472958.1	hypothetical protein	-
APV63_RS01695 (APV63_01695)	-	344071..344631 (+)	561	WP_060472959.1	hypothetical protein	-
APV63_RS08535 (APV63_01700)	-	344661..344804 (+)	144	WP_060472960.1	hypothetical protein	-
APV63_RS01705 (APV63_01705)	-	344979..345305 (+)	327	WP_235499225.1	lysozyme	-
APV63_RS07865	-	345600..345981 (+)	382	Protein_328	DUF1294 domain-containing protein	-
APV63_RS01720 (APV63_01720)	-	345981..346766 (+)	786	WP_060472963.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29808.75 Da
• Isoelectric Point: 8.8876

>NTDB_id=158170 APV63_RS01675 WP_060472955.1 341655..342455(+) (dprA) [Helicobacter pylori strain 7C]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPTTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=158170 APV63_RS01675 WP_060472955.1 341655..342455(+) (dprA) [Helicobacter pylori strain 7C]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAACAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAAGACTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAGAAATACCAAAAACCCTTATTTGTTTTACCCCAGCGCTTGAACGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGACGAATTTTTAGAATATTGCGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCACATTGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414