Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | AOT11_RS08885 | Genome accession | NZ_CP012881 |
| Coordinates | 1904664..1905311 (-) | Length | 215 a.a. |
| NCBI ID | WP_017420064.1 | Uniprot ID | A0A2S3SZL1 |
| Organism | Vibrio vulnificus NBRC 15645 = ATCC 27562 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1899664..1910311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOT11_RS08875 (AOT11_15910) | uvrA | 1900641..1903463 (-) | 2823 | WP_026050227.1 | excinuclease ABC subunit UvrA | - |
| AOT11_RS08880 (AOT11_15915) | galU | 1903606..1904478 (-) | 873 | WP_017420065.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| AOT11_RS08885 (AOT11_15920) | qstR | 1904664..1905311 (-) | 648 | WP_017420064.1 | response regulator transcription factor | Regulator |
| AOT11_RS08890 (AOT11_15925) | ssb | 1905611..1906150 (+) | 540 | WP_011079389.1 | single-stranded DNA-binding protein | Machinery gene |
| AOT11_RS08895 (AOT11_15930) | csrD | 1906303..1908300 (+) | 1998 | WP_026050228.1 | RNase E specificity factor CsrD | - |
| AOT11_RS08900 (AOT11_15935) | - | 1908313..1909773 (+) | 1461 | WP_017420062.1 | MSHA biogenesis protein MshI | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 24730.69 Da Isoelectric Point: 9.8565
>NTDB_id=158032 AOT11_RS08885 WP_017420064.1 1904664..1905311(-) (qstR) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPNRLTTEELIGFGQCKAIFYRDTTIADMTKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPNRLTTEELIGFGQCKAIFYRDTTIADMTKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
Nucleotide
Download Length: 648 bp
>NTDB_id=158032 AOT11_RS08885 WP_017420064.1 1904664..1905311(-) (qstR) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTTACTGTATT
AGCGAAACAGATTCAAATGGAAATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGCTGAGAGAGATTAAAAACCTACCGCTAATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAACCGATTGACGACTGAGGAACTGATTGGCTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACAACCATTGCAGACATGACCAAAGGACTAAATTCGGTGATTAATGGTAAGAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGCTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGCTACGCTGCGTGCAGTCTGGCAAATCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGCGAGTTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAACTTTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTTACTGTATT
AGCGAAACAGATTCAAATGGAAATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGCTGAGAGAGATTAAAAACCTACCGCTAATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAACCGATTGACGACTGAGGAACTGATTGGCTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACAACCATTGCAGACATGACCAAAGGACTAAATTCGGTGATTAATGGTAAGAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGCTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGCTACGCTGCGTGCAGTCTGGCAAATCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGCGAGTTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAACTTTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
60.93 |
100 |
0.609 |
| qstR | Vibrio campbellii strain DS40M4 |
60.93 |
100 |
0.609 |
| qstR | Vibrio cholerae strain A1552 |
46.729 |
99.535 |
0.465 |