Detailed information NTG0157771

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AO353_RS01465
• Genome accession: NZ_CP012830
• Coordinates: 313237..315471 (-)
• Length: 744 a.a.
• NCBI ID: WP_054593362.1
• Uniprot ID: A0A2N8BXZ2
• Organism: Pseudomonas fluorescens strain FW300-N2E3
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 308237..320471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AO353_RS01430 (AO353_01430)	murB	308605..309624 (-)	1020	WP_054593357.1	UDP-N-acetylmuramate dehydrogenase	-
AO353_RS01435 (AO353_01435)	-	309621..310085 (-)	465	WP_054593358.1	low molecular weight protein-tyrosine-phosphatase	-
AO353_RS01440 (AO353_01440)	kdsB	310085..310849 (-)	765	WP_054593359.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AO353_RS01445 (AO353_01445)	-	310846..311031 (-)	186	WP_019689343.1	Trm112 family protein	-
AO353_RS01450 (AO353_01450)	lpxK	311056..312066 (-)	1011	WP_054593360.1	tetraacyldisaccharide 4'-kinase	-
AO353_RS01455 (AO353_01455)	-	312066..312494 (-)	429	WP_054593361.1	ExbD/TolR family protein	-
AO353_RS01460 (AO353_01460)	exbB	312491..313126 (-)	636	WP_019689340.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
AO353_RS01465 (AO353_01465)	comA	313237..315471 (-)	2235	WP_054593362.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AO353_RS01470 (AO353_01470)	-	315606..316121 (+)	516	WP_054593363.1	DUF2062 domain-containing protein	-
AO353_RS01475 (AO353_01475)	-	316517..316891 (+)	375	WP_054593364.1	DUF6124 family protein	-
AO353_RS01480 (AO353_01480)	-	317237..318016 (-)	780	WP_019689336.1	ABC transporter permease	-
AO353_RS01485 (AO353_01485)	-	318013..318945 (-)	933	WP_054593365.1	ABC transporter ATP-binding protein	-
AO353_RS01490 (AO353_01490)	-	319079..319702 (-)	624	WP_054593366.1	glutathione S-transferase family protein	-
AO353_RS01495 (AO353_01495)	-	319748..320407 (-)	660	WP_054593367.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81519.90 Da
• Isoelectric Point: 9.6309

>NTDB_id=157771 AO353_RS01465 WP_054593362.1 313237..315471(-) (comA) [Pseudomonas fluorescens strain FW300-N2E3]
MRTGMLALALGLLALRFLPVLPPVWLLLLLPVLALMLLPFRTYPLAFFLFGFSWACASAHWALADRLAPDLDGQTRWVEG
RVVGLPQHAQGVVRFELADSESRRTRLPGLMRLAWYDGPTVNSGERWRLAVKLKRPTGLLNPQGFDYDAWLLAQRIGATG
SVKDGQLLRPAQGAWRDAVRQRLLAVDAQGREGALAALVLGDGSGLSSEDWRVLQDTGTVHLLVISGQHIGLLAGMVYLL
IAGLARYGLWPQRLPWLPWACGMAFAAALGYGLLAGFEVPVRRACVMIGLVLLWRLRFRHLGAWWPLLLALNTVLLLEPL
ASLQAGFWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPLLLILGLPISLSGPLTNLLAVPWISLVVLPPAL
LGTLLLPLPYVGEGLLWLAGGLLDVLFNGLALVAGRIPAWVAPMIPLWVWGISAFGAFLLLLPKGLPMRLLGWPMLLLMV
FPPLRSVPDGMAEIWQLDVGQGLAIVVRTRHHALLYDAGPRFGDFDLGERVVLPSLRKLGVRKLEVMLISHADADHAGGA
RSVARGLPVAQVLSGDPEALPAELYAQACESGQRWEWDGVGFTLWQWSGASESNQKSCVLQIEANGERLLLTGDIDAWAE
QALLESPLAVATDWLQAPHHGSRSSSSMAFLTALAPKAVLISRGHDNSFGHPHPQVLARYRKLGMQVYDSAEQGALRLRL
GAFEAPESLRQQPRFWRAPPLVSQ

Nucleotide

• Length: 2235 bp

>NTDB_id=157771 AO353_RS01465 WP_054593362.1 313237..315471(-) (comA) [Pseudomonas fluorescens strain FW300-N2E3]
ATGCGCACAGGGATGTTGGCGCTCGCGTTGGGTCTGTTGGCCTTGCGTTTTTTACCGGTGTTGCCACCGGTCTGGTTACT
GCTGTTGCTGCCCGTACTGGCATTGATGCTGTTGCCATTTCGCACGTACCCACTGGCGTTTTTTCTGTTCGGTTTCAGCT
GGGCGTGTGCCAGTGCGCACTGGGCCTTGGCGGATCGTTTGGCGCCGGACCTCGACGGGCAAACCCGCTGGGTCGAAGGA
CGAGTCGTCGGCTTGCCGCAGCACGCGCAAGGCGTGGTGCGTTTCGAGTTGGCCGATAGCGAATCGCGGCGCACACGCTT
GCCGGGTTTAATGCGATTGGCCTGGTACGACGGTCCGACGGTCAACAGCGGCGAGCGCTGGCGACTGGCGGTGAAATTGA
AGCGCCCCACAGGCCTGCTCAATCCGCAGGGCTTTGATTACGACGCTTGGCTGTTGGCACAACGCATCGGCGCGACGGGA
AGCGTCAAGGACGGGCAGTTGCTCCGGCCTGCACAAGGGGCCTGGCGTGATGCTGTTCGCCAGCGTTTGCTGGCGGTCGA
TGCACAAGGGCGAGAGGGGGCGTTGGCGGCGCTGGTGCTGGGCGACGGCTCTGGATTGAGCAGCGAAGACTGGCGCGTGT
TGCAAGACACCGGCACCGTGCATTTGCTGGTGATCTCCGGGCAGCACATCGGTTTGCTGGCCGGAATGGTTTATCTGCTG
ATTGCCGGATTGGCGCGTTATGGATTGTGGCCGCAGAGATTGCCTTGGTTGCCGTGGGCCTGCGGCATGGCATTCGCGGC
GGCGCTCGGCTATGGGTTGCTCGCCGGTTTCGAGGTGCCGGTGCGCCGAGCCTGCGTGATGATCGGTCTGGTGCTGTTAT
GGCGCCTGCGGTTTCGTCATCTGGGTGCCTGGTGGCCTTTGCTGCTGGCGTTGAATACGGTGTTGTTGCTTGAGCCGTTG
GCCAGTTTGCAGGCGGGGTTCTGGTTGTCATTTGCAGCGGTGGCGGTGCTGATTTTTACCTTCGGCGGCCGCCTGGGCGC
CTGGCGCTGGTGGCAAACCTGGACGCGGGCGCAATGGCTGATCGCGATTGGCTTGTGTCCGTTGCTGCTGATACTCGGTT
TGCCCATCAGTCTCAGTGGCCCGTTGACCAATCTGCTGGCCGTGCCGTGGATCAGCCTGGTGGTGTTGCCTCCGGCTTTG
CTGGGGACATTGTTGTTGCCGCTGCCTTATGTCGGCGAAGGGCTGTTGTGGCTGGCCGGCGGATTGCTCGACGTGCTGTT
CAACGGTCTCGCATTGGTGGCCGGGCGGATTCCGGCATGGGTTGCACCGATGATTCCGCTCTGGGTCTGGGGGATAAGTG
CGTTTGGCGCTTTTCTACTATTGCTGCCCAAAGGCCTGCCCATGCGTTTGTTGGGCTGGCCGATGTTGCTGTTGATGGTA
TTCCCGCCACTCAGATCCGTACCTGACGGCATGGCTGAAATCTGGCAACTGGACGTCGGCCAGGGGCTGGCCATCGTGGT
CCGCACGCGTCATCACGCGTTGCTCTATGACGCCGGTCCGCGTTTCGGTGATTTTGATCTGGGCGAGCGGGTGGTGTTGC
CGTCGTTGCGCAAGCTCGGTGTGCGCAAGCTGGAGGTGATGTTGATCAGTCATGCCGATGCCGATCACGCCGGTGGCGCG
CGCTCGGTCGCACGCGGATTGCCGGTGGCGCAGGTGCTCAGCGGTGATCCCGAAGCCCTGCCGGCCGAGTTGTACGCGCA
GGCCTGCGAGAGCGGTCAGCGCTGGGAGTGGGACGGTGTGGGTTTTACGCTCTGGCAATGGTCCGGGGCGAGTGAGAGCA
ACCAGAAGTCCTGCGTCCTGCAGATCGAAGCCAACGGCGAGCGTCTGTTGTTGACTGGCGACATCGACGCCTGGGCCGAG
CAGGCGTTGCTGGAAAGTCCGCTGGCGGTCGCGACCGACTGGCTACAAGCGCCGCATCACGGCAGTCGCAGCTCATCGTC
GATGGCCTTTCTCACCGCGTTGGCACCCAAGGCTGTGTTGATTTCTCGTGGGCACGACAATTCGTTCGGTCATCCGCATC
CGCAAGTGCTGGCGCGTTATCGCAAGCTGGGTATGCAGGTTTATGACAGCGCCGAGCAGGGCGCCTTGCGTTTGCGTCTG
GGGGCGTTCGAGGCGCCCGAGTCACTGCGCCAGCAACCACGTTTCTGGCGTGCACCGCCGTTGGTCAGCCAATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

• Domain of unknown function (DUF4131) (DUF4131) (22-167)

3D structure

• AlphaFold DB: A0A2N8BXZ2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.077	96.102	0.606
comA	Ralstonia pseudosolanacearum GMI1000	33.969	100	0.383