Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   AOY20_RS08770 Genome accession   NZ_CP012808
Coordinates   1836532..1837236 (-) Length   234 a.a.
NCBI ID   WP_054581501.1    Uniprot ID   A0A0N9W265
Organism   Acinetobacter equi strain 114     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1831532..1842236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOY20_RS08750 (AOY20_08750) - 1831750..1832430 (+) 681 WP_054581497.1 hypothetical protein -
  AOY20_RS08755 (AOY20_08755) - 1832497..1833900 (-) 1404 WP_054581498.1 LLM class flavin-dependent oxidoreductase -
  AOY20_RS08760 (AOY20_08760) - 1834218..1835060 (-) 843 WP_054581499.1 SPFH domain-containing protein -
  AOY20_RS08765 (AOY20_08765) - 1835315..1836364 (-) 1050 WP_054581500.1 NADP(H)-dependent aldo-keto reductase -
  AOY20_RS08770 (AOY20_08770) crp 1836532..1837236 (-) 705 WP_054581501.1 cAMP-activated global transcriptional regulator CRP Regulator
  AOY20_RS08775 (AOY20_08775) - 1837408..1837830 (+) 423 WP_054581502.1 OsmC family protein -
  AOY20_RS08780 (AOY20_08780) clpB 1838158..1840737 (+) 2580 WP_054581503.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26406.10 Da        Isoelectric Point: 4.8183

>NTDB_id=157763 AOY20_RS08770 WP_054581501.1 1836532..1837236(-) (crp) [Acinetobacter equi strain 114]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIIDPGSDSKSLYLILKGSVSIILREDDDREIVVAYLNPGDF
FGEMGLFEANPQRTAEVRTREVCEIAEITYENFHDLSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSTQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKALEEQGMIETDGKAILIFDASLESHEEPEFTNDVE

Nucleotide


Download         Length: 705 bp        

>NTDB_id=157763 AOY20_RS08770 WP_054581501.1 1836532..1837236(-) (crp) [Acinetobacter equi strain 114]
ATGACTTCAAACTTTTCACAACTTAGCACTGATGCACTATCTCCGGGTCAATTACCAGAGTCAGTAAAAGCATTATTAAA
ACGCGCTTATATTAATCGTTATCCAAAACGTACAACAATTATCGATCCAGGTTCAGACTCTAAGTCTTTATACTTAATCT
TAAAAGGTTCTGTATCTATCATTCTTCGTGAAGATGATGACCGTGAGATCGTTGTAGCTTATTTGAATCCTGGTGATTTC
TTTGGGGAAATGGGTCTTTTTGAAGCAAATCCACAACGTACTGCTGAAGTACGTACTCGTGAAGTATGTGAGATTGCTGA
AATTACTTATGAAAACTTCCATGATTTAAGCAAGCAATATCCTGACTTAAGCTACGCTGTATTCGCTCAGCTTGTACGTC
GTCTTAAAAATACAACTCGTAAAGTAACAGACTTAGCATTCATCGATGTTTCTGGTCGTATCGCACGTTGTTTAATCGAC
TTATCGACTCAACCTGAAGCAATGATTTTACCAAATGGCCGTCAAATTCGTATTACACGCCAAGAAATTGGTCGAATTGT
AGGCTGCTCACGTGAAATGGTTGGCCGTGTTCTTAAAGCGCTTGAAGAACAAGGTATGATTGAAACTGATGGTAAAGCAA
TTTTAATTTTTGATGCATCTTTAGAATCTCATGAAGAGCCTGAATTCACAAATGATGTTGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0N9W265

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

92.342

94.872

0.876
  crp Vibrio cholerae strain A1552

47.317

87.607

0.415
  crp Haemophilus influenzae Rd KW20

48.205

83.333

0.402

Multiple sequence alignment