Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   SanJ4211_RS01925 Genome accession   NZ_CP012805
Coordinates   364749..366707 (+) Length   652 a.a.
NCBI ID   WP_021001294.1    Uniprot ID   A0AAP6BPW8
Organism   Streptococcus anginosus strain J4211     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 359749..371707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS01910 (SanJ4211_0352) ftsL 360661..360981 (+) 321 WP_003025928.1 cell division protein FtsL -
  SanJ4211_RS01915 (SanJ4211_0353) pbp2X 360985..363240 (+) 2256 WP_057489576.1 penicillin-binding protein PBP2X -
  SanJ4211_RS01920 (SanJ4211_0354) mraY 363242..364225 (+) 984 WP_021001293.1 phospho-N-acetylmuramoyl-pentapeptide- transferase -
  SanJ4211_RS01925 (SanJ4211_0355) amiA3 364749..366707 (+) 1959 WP_021001294.1 peptide ABC transporter substrate-binding protein Regulator
  SanJ4211_RS01935 (SanJ4211_0356) - 367177..368058 (+) 882 WP_003025917.1 class II fructose-bisphosphate aldolase -
  SanJ4211_RS01940 (SanJ4211_0357) - 368172..368408 (+) 237 Protein_354 GNAT family N-acetyltransferase -
  SanJ4211_RS01950 (SanJ4211_0358) - 368740..369186 (+) 447 WP_003025913.1 LytTR family DNA-binding domain-containing protein -
  SanJ4211_RS01955 (SanJ4211_0359) - 369192..369854 (+) 663 WP_003025911.1 LiaF transmembrane domain-containing protein -
  SanJ4211_RS01960 (SanJ4211_0360) rpmB 369990..370178 (+) 189 WP_003025909.1 50S ribosomal protein L28 -
  SanJ4211_RS01965 (SanJ4211_0361) - 370354..370719 (+) 366 WP_003025907.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72441.72 Da        Isoelectric Point: 7.3789

>NTDB_id=157683 SanJ4211_RS01925 WP_021001294.1 364749..366707(+) (amiA3) [Streptococcus anginosus strain J4211]
MKSSKWIIATGVVLSAGILLAGCGKSASSTSTYSYVYTQDPDTLNYLMANRATTSDVVTNLVDGLLENDQYGNLVPALAK
SWTVSKDGLTYTYKLRKDAKWYTSEGEEYASVKAQDFVTGLKYAADNKSEALYLIQDSVKGLDAYIKGETKDFSMVGVKA
LDDYTVQYTLSRAETYWNSKTTNNILFPVNADFLKSQGKNFGSVKPTSILYNGPYLLKSLTAKSSMEFAKNPHYYDKKNV
HLDNIKLTYYDGSDQEALIRNFTDGAYSAARLYPNSSSFASVKKQYANNIIYSLQDATSYYYNFNLNRQSYNHTSKKTDA
QKAATQEAVLNKAFRQAINFAYNRTSYGAQSNGKDGATKVLRNTLVPPTFVSIGDKTFGDVVSSKLVNYGSEWSNMNLAD
AQDAYYNPEKAKAKFAQAKAELQAKGVQFPIHLDVPADQTSKIGVQWESSMKQSVESVLGTENVVIDIQQMSSDELNNIS
YFANTAAQKDYDLYNGGWSGDYQDPSTYLDTLNTKNGGSLQNFGLEPGQENDKIKAVGLDTYTEMLAEANAETNETTRYE
KYAEAQAWLIDSGLTMPNLSLGGTPSVTKTVPFSRSYSLVGIKGASSSYFKYVKLQDKIVTTKEYESAKKKWLKEKEISN
KKAQDDYENHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=157683 SanJ4211_RS01925 WP_021001294.1 364749..366707(+) (amiA3) [Streptococcus anginosus strain J4211]
ATGAAATCATCAAAATGGATTATTGCAACAGGAGTTGTACTAAGTGCTGGAATCTTATTGGCAGGTTGTGGCAAGTCAGC
TTCTAGCACATCAACTTATTCATACGTGTATACACAAGATCCAGACACGCTAAATTATCTGATGGCGAACCGTGCGACAA
CTTCAGATGTTGTGACTAACTTAGTTGATGGATTATTGGAAAATGACCAGTACGGAAATTTAGTTCCGGCGCTTGCTAAG
TCATGGACAGTCTCCAAAGATGGCTTGACATATACGTATAAATTACGTAAAGATGCTAAATGGTACACATCAGAAGGTGA
AGAGTACGCAAGTGTAAAAGCGCAAGACTTTGTAACTGGCTTGAAATACGCCGCAGATAATAAATCAGAAGCCCTTTACC
TCATTCAAGATTCTGTCAAAGGTTTGGATGCTTACATCAAGGGTGAAACGAAAGATTTTTCAATGGTTGGAGTAAAAGCT
CTAGATGACTATACAGTACAGTATACACTCAGCCGTGCAGAGACTTATTGGAATTCAAAAACGACCAATAATATCCTCTT
CCCAGTTAATGCAGATTTCTTGAAATCACAAGGAAAAAATTTTGGTTCTGTAAAACCAACCAGCATTCTATACAATGGTC
CTTATCTATTGAAGTCTCTGACAGCCAAGTCTTCTATGGAATTTGCTAAAAATCCTCATTACTATGATAAAAAGAATGTT
CATTTGGATAACATTAAATTGACATATTATGACGGCTCTGACCAAGAAGCCCTTATCCGTAACTTCACAGATGGTGCCTA
TAGTGCAGCTCGTCTTTATCCAAATAGCTCTAGTTTTGCTTCTGTTAAGAAACAATATGCTAACAATATCATCTATAGTT
TGCAAGATGCGACCAGCTACTATTATAACTTTAATTTAAATCGTCAGTCTTACAACCATACATCGAAGAAAACAGATGCT
CAAAAGGCTGCGACACAAGAAGCGGTGCTAAACAAAGCTTTCCGTCAAGCTATCAACTTTGCCTATAATCGTACTTCTTA
TGGTGCACAAAGTAATGGGAAAGACGGAGCAACAAAGGTATTGCGGAACACACTCGTGCCACCAACATTTGTTTCTATCG
GTGATAAAACGTTTGGTGATGTTGTGTCTTCTAAGCTAGTAAACTATGGCTCAGAATGGTCAAACATGAATTTAGCCGAT
GCACAAGATGCTTATTACAATCCAGAAAAAGCTAAAGCAAAGTTTGCTCAAGCTAAAGCAGAACTGCAAGCAAAGGGTGT
TCAGTTCCCTATCCACTTAGATGTACCAGCTGATCAGACAAGTAAAATTGGTGTTCAATGGGAAAGTTCCATGAAGCAAT
CTGTTGAGTCCGTCTTGGGCACAGAAAATGTTGTCATTGATATTCAACAAATGAGTTCAGATGAATTAAATAATATCAGT
TATTTTGCTAATACAGCTGCTCAAAAAGACTACGATCTGTATAATGGTGGTTGGTCTGGTGACTATCAAGACCCATCTAC
TTATCTAGATACTTTGAATACAAAAAATGGTGGTAGTTTACAAAACTTTGGTCTGGAACCAGGTCAAGAAAATGATAAGA
TCAAGGCAGTTGGACTGGACACATATACAGAGATGCTAGCAGAAGCAAATGCTGAAACCAATGAAACTACACGCTATGAA
AAATATGCCGAGGCACAAGCATGGTTAATCGATAGTGGCTTGACAATGCCAAACCTCTCTCTTGGAGGAACACCGTCCGT
GACGAAAACAGTTCCATTTAGCCGTTCTTACTCATTAGTTGGAATCAAAGGTGCTTCAAGCAGTTACTTTAAATATGTCA
AATTGCAAGACAAAATTGTAACAACAAAAGAATACGAAAGTGCTAAAAAGAAATGGCTAAAAGAAAAAGAAATCTCTAAT
AAAAAAGCACAAGATGACTACGAAAATCATGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

57.534

100

0.58
  amiA3 Streptococcus thermophilus LMG 18311

57.382

100

0.578
  amiA Streptococcus salivarius strain HSISS4

57.382

100

0.578

Multiple sequence alignment