Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | AN924_RS04970 | Genome accession | NZ_CP012731 |
| Coordinates | 987887..988153 (-) | Length | 88 a.a. |
| NCBI ID | WP_002939335.1 | Uniprot ID | A0A126UJ45 |
| Organism | Streptococcus suis strain 90-1330 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 982887..993153
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN924_RS04930 (AN924_10330) | rpsC | 983209..983862 (-) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
| AN924_RS04935 (AN924_10350) | rplV | 983875..984219 (-) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| AN924_RS04940 (AN924_10360) | rpsS | 984237..984518 (-) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| AN924_RS04945 (AN924_10370) | rplB | 984620..985453 (-) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| AN924_RS04950 (AN924_10380) | - | 985471..985770 (-) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| AN924_RS04955 (AN924_10390) | rplD | 985770..986393 (-) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| AN924_RS04960 (AN924_10400) | rplC | 986418..987044 (-) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| AN924_RS04965 (AN924_10410) | rpsJ | 987257..987565 (-) | 309 | WP_013730061.1 | 30S ribosomal protein S10 | - |
| AN924_RS04970 (AN924_10420) | comX/sigX | 987887..988153 (-) | 267 | WP_002939335.1 | hypothetical protein | Regulator |
| AN924_RS04975 (AN924_10430) | - | 988226..988804 (-) | 579 | WP_044667815.1 | nucleotidyltransferase family protein | - |
| AN924_RS04980 (AN924_10440) | - | 989062..989382 (-) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| AN924_RS04985 (AN924_10450) | ruvX | 989394..989813 (-) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| AN924_RS04990 (AN924_10460) | - | 989813..990079 (-) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| AN924_RS04995 (AN924_10470) | spx | 990179..990577 (-) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| AN924_RS05000 (AN924_10480) | recA | 990813..991964 (-) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10717.52 Da Isoelectric Point: 9.1949
>NTDB_id=157357 AN924_RS04970 WP_002939335.1 987887..988153(-) (comX/sigX) [Streptococcus suis strain 90-1330]
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=157357 AN924_RS04970 WP_002939335.1 987887..988153(-) (comX/sigX) [Streptococcus suis strain 90-1330]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
73.973 |
82.955 |
0.614 |
| comX/sigX | Streptococcus suis isolate S10 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis P1/7 |
72.603 |
82.955 |
0.602 |
| comX/sigX/comX1/sigX1 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |
| comX/sigX/comX2/sigX2 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |