Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   SanJ4206_RS07705 Genome accession   NZ_CP012719
Coordinates   1586060..1588036 (-) Length   658 a.a.
NCBI ID   WP_022525151.1    Uniprot ID   -
Organism   Streptococcus anginosus strain J4206     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1581060..1593036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS07690 (SanJ4206_1491c) amiD 1581087..1582013 (-) 927 WP_003026180.1 oligopeptide ABC transporter permease OppC Regulator
  SanJ4206_RS07695 (SanJ4206_1492c) amiC 1582013..1583509 (-) 1497 WP_022525149.1 ABC transporter permease Regulator
  SanJ4206_RS07700 (SanJ4206_1493c) amiA3 1583884..1585863 (-) 1980 WP_022525150.1 peptide ABC transporter substrate-binding protein Regulator
  SanJ4206_RS07705 (SanJ4206_1494c) amiA3 1586060..1588036 (-) 1977 WP_022525151.1 peptide ABC transporter substrate-binding protein Regulator
  SanJ4206_RS07710 (SanJ4206_1495c) - 1588201..1588887 (-) 687 WP_004224098.1 B3/4 domain-containing protein -
  SanJ4206_RS07715 (SanJ4206_1496c) - 1589118..1590728 (-) 1611 WP_004224101.1 CTP synthase -
  SanJ4206_RS07720 (SanJ4206_1497c) rpoE 1590911..1591498 (-) 588 WP_022525152.1 DNA-directed RNA polymerase subunit delta -
  SanJ4206_RS07725 (SanJ4206_1498c) tig 1591736..1593019 (-) 1284 WP_004224106.1 trigger factor -

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72496.08 Da        Isoelectric Point: 6.6800

>NTDB_id=156797 SanJ4206_RS07705 WP_022525151.1 1586060..1588036(-) (amiA3) [Streptococcus anginosus strain J4206]
MKKSKIIAVAGLALLTSGLLAACSGSKSSSAETKFGYVYSSDPETLDYVTSGKATTSDLVTNGVDGLLENDKYGNLVPSM
AKSWTVSKDGLTYTYKLRKGAKWYTSEGEEYAEVKAQDFVTGLKHAADKKSEALYLVQNSIKGLDAYVNGQTKDFSTVGV
KAVDDYTVQYTLNKPEPYWNSKTTSAIMWPINAEFLKSKGNKFGQSTDPNSILYNGPFLMKAITAKSAVEYVKNKHYWDK
DKVNVDSIKLAYYDGQDQDSLARNFKDGAYTYARLFPASSNFSTFEKDFKDNIYTSEAGAGTAVLGLNIDRQTYNHTAKK
TDEEKNSTKKALLNKDFRQALNFALDRDSYAAQVNGKEGAAKAIRNMFVPSDFVQVGEKSFSDVVEEKLASYGDDWKGVK
LADSQNGLYNPDKAKAKFAKAKEALQAQGVQFPIHIDVPVIETSKNFVARMQSMKQSIEKVLGKENVVMDLNMMSEDDVM
NITYYAPNAASEDWDLSGIVSWTPDYQDPSTYLDILKSTSSDNTKTWFGFDSGSENAGAKAVGLDEYNKLVDEAGAETTD
IAKRYEKYAAAQAWLTDSSLVLPTMASTGAGTFVSRIQPFSGAFAQTGSKGSSTYFKYIKVGNDTVTKKDYEAAKKKWQK
EKAESNKKAQDELADHVK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=156797 SanJ4206_RS07705 WP_022525151.1 1586060..1588036(-) (amiA3) [Streptococcus anginosus strain J4206]
ATGAAAAAAAGTAAAATCATCGCAGTTGCGGGGCTAGCTCTTTTAACGTCTGGTCTTTTAGCTGCTTGCTCGGGTTCGAA
ATCGAGCTCAGCTGAAACAAAATTTGGTTATGTGTATTCTAGTGATCCAGAAACTTTGGATTATGTAACATCAGGAAAAG
CAACCACTAGCGATCTTGTGACAAATGGAGTTGACGGATTGTTAGAAAATGACAAATATGGAAATCTTGTACCATCAATG
GCTAAGTCATGGACTGTATCAAAAGATGGTTTAACCTATACTTATAAACTTCGTAAGGGTGCCAAATGGTACACATCAGA
AGGGGAAGAATACGCAGAAGTTAAAGCGCAAGACTTTGTAACTGGTTTGAAACATGCTGCCGATAAAAAATCTGAGGCGC
TTTATTTGGTTCAAAACTCAATTAAAGGTTTAGATGCTTACGTGAATGGTCAAACAAAAGACTTTTCAACGGTAGGTGTG
AAAGCAGTTGATGATTATACTGTTCAGTATACATTGAACAAGCCAGAACCATATTGGAATTCTAAGACAACCTCTGCCAT
TATGTGGCCAATCAATGCCGAATTTTTGAAATCTAAAGGAAATAAATTTGGCCAATCAACAGACCCTAACTCAATCCTTT
ATAATGGACCATTCTTGATGAAAGCTATCACAGCAAAATCTGCGGTAGAATATGTTAAAAACAAACATTATTGGGATAAA
GATAAAGTAAATGTTGATAGCATCAAGTTGGCTTATTATGATGGTCAAGACCAAGATTCATTAGCACGTAACTTTAAAGA
TGGTGCTTATACGTATGCACGTCTCTTCCCAGCAAGTTCAAACTTTTCAACTTTTGAAAAGGACTTCAAAGACAATATCT
ATACATCAGAAGCTGGTGCAGGAACAGCAGTTTTAGGACTTAATATTGACCGTCAAACGTACAACCACACTGCTAAAAAA
ACAGATGAAGAAAAAAATTCAACGAAAAAAGCATTGTTGAATAAAGACTTCCGTCAAGCGCTGAACTTTGCGCTTGACCG
CGACTCTTACGCTGCACAAGTCAATGGTAAAGAGGGCGCTGCTAAAGCAATCCGCAATATGTTTGTACCGTCTGACTTTG
TCCAAGTTGGAGAAAAATCATTTAGCGATGTTGTAGAAGAAAAATTAGCTAGCTATGGTGATGACTGGAAGGGTGTCAAA
TTAGCAGATTCACAAAACGGTTTGTACAATCCAGACAAAGCAAAAGCGAAATTTGCAAAAGCAAAAGAAGCATTGCAAGC
TCAAGGTGTGCAATTCCCAATCCACATAGATGTTCCTGTAATTGAAACTTCTAAAAACTTTGTTGCTCGTATGCAATCTA
TGAAACAATCTATTGAAAAAGTGCTTGGCAAAGAAAATGTTGTCATGGACTTGAATATGATGTCAGAAGATGATGTAATG
AACATCACTTATTATGCTCCGAATGCAGCTAGCGAAGATTGGGATCTCTCAGGTATCGTTAGTTGGACTCCTGACTATCA
AGACCCATCTACTTATCTTGACATTTTGAAATCAACATCTTCTGATAATACGAAAACTTGGTTTGGATTTGACTCTGGTA
GTGAAAATGCTGGTGCTAAAGCAGTTGGCTTGGACGAATATAATAAATTAGTCGATGAAGCAGGTGCAGAAACAACAGAC
ATTGCAAAACGTTATGAAAAATATGCAGCAGCACAAGCTTGGTTAACAGACAGTTCACTTGTCTTACCAACAATGGCTTC
AACAGGTGCCGGAACTTTTGTGTCACGCATTCAACCGTTCTCAGGTGCATTTGCGCAAACAGGTAGTAAAGGTAGCTCAA
CCTACTTCAAATACATTAAAGTCGGTAACGATACTGTCACTAAGAAAGACTATGAAGCAGCTAAGAAGAAATGGCAAAAA
GAAAAAGCCGAGTCTAATAAAAAAGCTCAAGATGAATTAGCTGATCATGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

63.581

100

0.637
  amiA3 Streptococcus thermophilus LMG 18311

63.429

100

0.635
  amiA Streptococcus salivarius strain HSISS4

63.222

100

0.632

Multiple sequence alignment