Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   RN86_RS10335 Genome accession   NZ_CP012648
Coordinates   2125490..2126293 (-) Length   267 a.a.
NCBI ID   WP_045502133.1    Uniprot ID   A0AAW3H5K1
Organism   Streptococcus gordonii strain KCOM 1506 (= ChDC B679)     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2120490..2131293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RN86_RS10320 (RN86_10325) smc 2120635..2124168 (-) 3534 WP_053794799.1 chromosome segregation protein SMC -
  RN86_RS10325 (RN86_10330) rnc 2124159..2124857 (-) 699 WP_012000242.1 ribonuclease III -
  RN86_RS10330 (RN86_10335) - 2125099..2125455 (-) 357 WP_045773784.1 YbaN family protein -
  RN86_RS10335 (RN86_10340) vicX 2125490..2126293 (-) 804 WP_045502133.1 MBL fold metallo-hydrolase Regulator
  RN86_RS10340 (RN86_10345) micB 2126286..2127647 (-) 1362 WP_053794800.1 cell wall metabolism sensor histidine kinase VicK Regulator
  RN86_RS10345 (RN86_10350) micA 2127640..2128341 (-) 702 WP_012000241.1 response regulator YycF Regulator
  RN86_RS10350 (RN86_10355) thrS 2128550..2130493 (-) 1944 WP_053794801.1 threonine--tRNA ligase -
  RN86_RS11700 (RN86_10360) - 2130599..2130955 (-) 357 WP_053794916.1 hypothetical protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29732.68 Da        Isoelectric Point: 5.9444

>NTDB_id=156106 RN86_RS10335 WP_045502133.1 2125490..2126293(-) (vicX) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
MTKEGFKYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=156106 RN86_RS10335 WP_045502133.1 2125490..2126293(-) (vicX) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCTAGTGGTAATTGTTTTTATTTAGAAACAGACAAAAA
GAAGATTTTGGTGGATGCGGGACTATCTGGTAAAAAAATTACTAGTCTCCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTTTTAGCCCGTAAGTATAACTTAGAT
ATCTATGCTAATGAAGATACTTGGAAAGCCATGGATAGTGCTTTGGGAAAAATTGATATCAGTCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACGATAAAAGTTTTGTTATGCTGACGGATACGGGCTATGTGAGTGATCGTATGGCTGGAGTAGTT
GAAAATGCTGATGGTTACTTGATTGAGAGTAATCATGATGTAGAAATTTTGCGTAGTGGAGCTTACCCTTGGAGTCTTAA
GCAACGTATTTTATCCGATAAAGGGCATTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAACCGAA
CCAAAAAGATTTATCTAGGTCACTTAAGTAAGGAGAATAATATCAAGGAGCTGGCTCATATGACTATGGTTAATCAGCTG
GCTCAAGCTGACTTGGCAGTCAATCATGATTTTCAGGTTTTAGATACTTCTCCTGATACTGCTACACCTCTGACATCAAT
TTAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.15

100

0.802

Multiple sequence alignment