Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RN86_RS04510 Genome accession   NZ_CP012648
Coordinates   907595..908851 (+) Length   418 a.a.
NCBI ID   WP_172672772.1    Uniprot ID   -
Organism   Streptococcus gordonii strain KCOM 1506 (= ChDC B679)     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 902595..913851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RN86_RS04490 (RN86_04485) - 902996..905110 (+) 2115 WP_053794345.1 ATP-dependent Clp protease ATP-binding subunit -
  RN86_RS04495 (RN86_04490) yajC 905284..905616 (+) 333 WP_012130881.1 preprotein translocase subunit YajC -
  RN86_RS04500 (RN86_04495) - 905877..906626 (+) 750 WP_053794346.1 isoprenyl transferase -
  RN86_RS04505 (RN86_04500) - 906635..907438 (+) 804 WP_012130880.1 phosphatidate cytidylyltransferase -
  RN86_RS04510 (RN86_04505) eeP 907595..908851 (+) 1257 WP_172672772.1 RIP metalloprotease RseP Regulator
  RN86_RS04515 (RN86_04510) - 908927..910777 (+) 1851 WP_053794347.1 proline--tRNA ligase -
  RN86_RS04520 (RN86_04515) - 910868..911248 (+) 381 WP_045773451.1 PH domain-containing protein -
  RN86_RS04525 (RN86_04520) - 911352..911819 (-) 468 WP_053794348.1 hypothetical protein -
  RN86_RS04530 (RN86_04525) - 911932..912474 (-) 543 WP_046164684.1 lipoprotein -

Sequence


Protein


Download         Length: 418 a.a.        Molecular weight: 45667.13 Da        Isoelectric Point: 6.5095

>NTDB_id=156080 RN86_RS04510 WP_172672772.1 907595..908851(+) (eeP) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
MMGLLTFIIVFGIIVVVHEYGHFYFAKKSGILVREFAIGMGPKIFSHIGKDGTAYTIRILPLGGYVRMAGWSDDATEIKT
GTPVSLTLNEEGKVIRVNLSGKKIDQTALPMNVTSFDFEDKLEITGLVLEESRTYSVDHDATIVEADGTEVRIAPLDVQY
QNATIWGRLITNFAGPMNNFILGIVAFWILIALQGGVQNLDTNHVQVAPNGALAQAGVKNNDQILKVGQTEISNWDDLTQ
AVEKETKDQKNPKLNLTVKSGNETKDVTVSPKKEGDRYLLGVTPGMKSDLMSMVVGGLTMAWDAAFRILNALKNLIFHPS
LNQLGGPVAIFRVSSQAAQAGLDQVISLLALLSINIGIFNLIPIPALDGGKIVLNIIEAIRRKPLKRETETYVTLAGVAI
MVVLMIAVTWNDIMRTFF

Nucleotide


Download         Length: 1257 bp        

>NTDB_id=156080 RN86_RS04510 WP_172672772.1 907595..908851(+) (eeP) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
ATTATGGGACTCCTCACCTTCATCATTGTTTTTGGTATTATTGTAGTGGTTCATGAGTATGGACATTTCTACTTTGCCAA
AAAGTCAGGCATTCTCGTTCGAGAGTTTGCCATTGGAATGGGACCGAAAATCTTTTCTCATATTGGAAAAGATGGAACAG
CCTATACCATTCGGATTCTTCCTCTAGGTGGCTATGTGCGCATGGCTGGCTGGAGTGATGATGCAACTGAAATCAAAACT
GGAACACCTGTCAGTCTGACTCTGAATGAAGAAGGCAAGGTTATTCGAGTAAATCTATCTGGCAAGAAGATTGATCAGAC
AGCCCTGCCGATGAATGTGACAAGTTTTGATTTTGAAGATAAATTAGAAATCACTGGTTTAGTTCTTGAAGAAAGTAGAA
CCTACTCAGTTGATCACGATGCAACTATCGTTGAAGCAGATGGGACAGAAGTTCGGATTGCGCCTTTGGATGTTCAGTAC
CAAAATGCAACAATCTGGGGTCGTTTAATCACAAACTTTGCTGGCCCTATGAATAACTTTATTTTGGGTATCGTGGCTTT
TTGGATTCTAATTGCTCTGCAAGGTGGGGTTCAAAATCTGGACACAAATCATGTACAGGTTGCTCCAAACGGCGCCTTGG
CTCAGGCTGGTGTAAAAAATAACGACCAGATTCTAAAGGTTGGTCAGACAGAAATTTCAAACTGGGACGATTTGACTCAG
GCAGTTGAAAAAGAAACGAAGGATCAAAAGAATCCCAAACTTAACCTGACAGTTAAAAGCGGAAACGAGACCAAAGATGT
GACAGTCAGTCCTAAAAAAGAAGGGGACCGTTATTTGTTAGGTGTCACGCCAGGTATGAAGTCGGATCTGATGTCCATGG
TGGTAGGTGGTCTGACCATGGCTTGGGATGCGGCCTTCCGTATTTTAAATGCTTTGAAAAACTTGATTTTCCATCCTAGT
CTGAATCAACTGGGAGGACCGGTTGCTATCTTCCGCGTCAGCAGTCAAGCGGCGCAAGCTGGTCTGGATCAGGTGATTAG
TCTATTGGCTCTGTTATCAATCAATATTGGTATTTTCAATTTGATTCCGATTCCAGCTCTTGACGGTGGAAAGATTGTTC
TCAACATTATTGAAGCAATTCGCAGAAAACCGCTCAAGCGCGAAACAGAGACTTATGTAACCTTAGCAGGTGTAGCGATT
ATGGTTGTGCTGATGATTGCTGTGACCTGGAATGATATTATGCGTACATTCTTTTAA

Domains


Predicted by InterproScan.

(205-269)

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

63.81

100

0.641

  eeP Streptococcus thermophilus LMD-9

63.571

100

0.639


Multiple sequence alignment