Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | RN80_RS05045 | Genome accession | NZ_CP012646 |
| Coordinates | 1033983..1034573 (+) | Length | 196 a.a. |
| NCBI ID | WP_000613471.1 | Uniprot ID | A0A1E9GI28 |
| Organism | Streptococcus mitis strain KCOM 1350 (= ChDC B183) | ||
| Function | degradation of ComX; degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1028983..1039573
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RN80_RS05015 (RN80_05035) | - | 1029062..1029802 (+) | 741 | WP_060627912.1 | MerR family transcriptional regulator | - |
| RN80_RS05020 (RN80_05040) | - | 1029845..1031020 (-) | 1176 | WP_004256803.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| RN80_RS05025 (RN80_05045) | - | 1031078..1031923 (-) | 846 | WP_004256807.1 | DegV family protein | - |
| RN80_RS05030 (RN80_05050) | - | 1032048..1032605 (+) | 558 | WP_000004136.1 | TetR/AcrR family transcriptional regulator | - |
| RN80_RS05035 (RN80_05055) | - | 1032624..1033091 (+) | 468 | WP_000136976.1 | deoxycytidylate deaminase | - |
| RN80_RS05040 (RN80_05060) | upp | 1033180..1033809 (+) | 630 | WP_000515974.1 | uracil phosphoribosyltransferase | - |
| RN80_RS05045 (RN80_05065) | clpP | 1033983..1034573 (+) | 591 | WP_000613471.1 | ATP-dependent Clp protease proteolytic subunit ClpP | Regulator |
| RN80_RS05050 (RN80_05070) | - | 1034652..1034939 (+) | 288 | WP_000462127.1 | YlbG family protein | - |
| RN80_RS05055 (RN80_05075) | - | 1035006..1036166 (+) | 1161 | WP_045611943.1 | ABC transporter substrate-binding protein | - |
| RN80_RS05060 (RN80_05080) | - | 1036281..1037150 (+) | 870 | WP_060627914.1 | branched-chain amino acid ABC transporter permease | - |
| RN80_RS05065 (RN80_05085) | - | 1037154..1038110 (+) | 957 | WP_000662286.1 | branched-chain amino acid ABC transporter permease | - |
| RN80_RS05070 (RN80_05090) | - | 1038110..1038874 (+) | 765 | WP_001185995.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21352.38 Da Isoelectric Point: 4.4910
>NTDB_id=156019 RN80_RS05045 WP_000613471.1 1033983..1034573(+) (clpP) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNILEKILAENSGQ
SIEKVHADAERDNWMSAQETLEYGFIDEIMANNSLN
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNILEKILAENSGQ
SIEKVHADAERDNWMSAQETLEYGFIDEIMANNSLN
Nucleotide
Download Length: 591 bp
>NTDB_id=156019 RN80_RS05045 WP_000613471.1 1033983..1034573(+) (clpP) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
ATGATTCCTGTAGTTATTGAACAAACAAGTCGTGGAGAACGTTCCTACGATATTTACTCACGTCTTCTCAAAGACCGCAT
CATCATGCTGACAGGTCCAGTTGAAGACAATATGGCTAACTCTGTTATTGCCCAATTGCTTTTCTTGGATGCCCAAGACA
GTACAAAAGATATTTACCTTTATGTCAATACACCTGGTGGTTCAGTTTCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATCAAGGCAGATGTCCAAACTATCGTTATGGGGATGGCTGCATCTATGGGGACTGTCATCGCGTCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTATATGATCCACCAACCAATGGGTGGTACAGGTGGTGGTACTCAACAAA
CCGATATGGCGATTGCTGCAGAACACTTGCTCAAAACTCGTAACATCTTGGAAAAAATCTTGGCTGAAAATTCAGGTCAG
TCAATCGAAAAAGTCCATGCAGATGCAGAACGCGATAATTGGATGAGCGCCCAAGAAACACTTGAATATGGCTTTATTGA
TGAAATCATGGCCAACAATTCATTGAACTAA
ATGATTCCTGTAGTTATTGAACAAACAAGTCGTGGAGAACGTTCCTACGATATTTACTCACGTCTTCTCAAAGACCGCAT
CATCATGCTGACAGGTCCAGTTGAAGACAATATGGCTAACTCTGTTATTGCCCAATTGCTTTTCTTGGATGCCCAAGACA
GTACAAAAGATATTTACCTTTATGTCAATACACCTGGTGGTTCAGTTTCAGCTGGTTTGGCAATCGTTGATACCATGAAC
TTTATCAAGGCAGATGTCCAAACTATCGTTATGGGGATGGCTGCATCTATGGGGACTGTCATCGCGTCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTATATGATCCACCAACCAATGGGTGGTACAGGTGGTGGTACTCAACAAA
CCGATATGGCGATTGCTGCAGAACACTTGCTCAAAACTCGTAACATCTTGGAAAAAATCTTGGCTGAAAATTCAGGTCAG
TCAATCGAAAAAGTCCATGCAGATGCAGAACGCGATAATTGGATGAGCGCCCAAGAAACACTTGAATATGGCTTTATTGA
TGAAATCATGGCCAACAATTCATTGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pneumoniae Rx1 |
98.98 |
100 |
0.99 |
| clpP | Streptococcus pneumoniae D39 |
98.98 |
100 |
0.99 |
| clpP | Streptococcus pneumoniae R6 |
98.98 |
100 |
0.99 |
| clpP | Streptococcus pneumoniae TIGR4 |
98.98 |
100 |
0.99 |
| clpP | Streptococcus thermophilus LMG 18311 |
93.333 |
99.49 |
0.929 |
| clpP | Streptococcus thermophilus LMD-9 |
93.333 |
99.49 |
0.929 |
| clpP | Streptococcus pyogenes JRS4 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus pyogenes MGAS315 |
91.282 |
99.49 |
0.908 |
| clpP | Streptococcus mutans UA159 |
86.224 |
100 |
0.862 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
85.128 |
99.49 |
0.847 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
84.615 |
99.49 |
0.842 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
58.854 |
97.959 |
0.577 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
58.549 |
98.469 |
0.577 |