Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   RN80_RS03110 Genome accession   NZ_CP012646
Coordinates   584291..585550 (+) Length   419 a.a.
NCBI ID   WP_060627434.1    Uniprot ID   -
Organism   Streptococcus mitis strain KCOM 1350 (= ChDC B183)     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 579291..590550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RN80_RS03080 (RN80_03090) - 579352..579768 (+) 417 WP_049499492.1 GNAT family N-acetyltransferase -
  RN80_RS09575 (RN80_03095) - 580596..580688 (-) 93 WP_000970382.1 type I toxin-antitoxin system Fst family toxin -
  RN80_RS03085 (RN80_03100) ruvB 580811..581809 (+) 999 WP_080998486.1 Holliday junction branch migration DNA helicase RuvB -
  RN80_RS03090 (RN80_03105) - 581790..582362 (+) 573 WP_060627430.1 nucleotidyltransferase family protein -
  RN80_RS03100 (RN80_03110) - 582699..583457 (+) 759 WP_060627432.1 isoprenyl transferase -
  RN80_RS03105 (RN80_03115) - 583466..584269 (+) 804 WP_000189860.1 phosphatidate cytidylyltransferase -
  RN80_RS03110 (RN80_03120) eeP 584291..585550 (+) 1260 WP_060627434.1 RIP metalloprotease RseP Regulator
  RN80_RS03115 (RN80_03125) - 585563..587416 (+) 1854 WP_060627436.1 proline--tRNA ligase -
  RN80_RS03120 (RN80_03130) bglA 587515..588894 (+) 1380 WP_024057399.1 6-phospho-beta-glucosidase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45848.50 Da        Isoelectric Point: 5.9925

>NTDB_id=156001 RN80_RS03110 WP_060627434.1 584291..585550(+) (eeP) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLTDDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFGVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWILIFMQGGVRDVDTNQFHVMPQGALAKVGVPETAQITKIGSHEVSNWESLIQ
AVESETKDKTAPTLDVTISEKGSDKQVTVTPEESQGRYLLGVQPGIKSDFVSMFVGGFTTAADSALRILSALKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENVLYFLAIISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=156001 RN80_RS03110 WP_060627434.1 584291..585550(+) (eeP) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTTGGGATTATTGTAGTGGTGCACGAGTTCGGACACTTCTACTTTGCCAA
GAAATCAGGGATTCTAGTGCGTGAATTTGCCATTGGCATGGGACCCAAGATCTTTGCTCATATTGGCAAGGATGGAACAG
CCTATACCATCCGAATCTTGCCTCTGGGTGGCTATGTTCGCATGGCCGGTTGGGGTGATGATACGACTGAAATCAAGACA
GGAACTCCTGTCAGTTTGACGCTTACTGATGATGGTAAGGTTAAACGCATCAATCTCTCAGGTAAAAAATTGGATCAAAC
AGCTCTTCCTATGCAGGTGACCCAGTTTGACTTTGAAGACAAGCTCTTTATCAAGGGTTTGGTTCTGGAAGAAGAAAAAA
CATTTGGAGTGGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGGAAACTGATTACCAACTTTGCAGGTCCTATGAACAACTTTATCTTAGGTGTCGTTGTTTT
TTGGATTTTAATCTTTATGCAGGGTGGTGTCAGAGATGTTGATACCAACCAGTTCCATGTCATGCCCCAAGGGGCCTTGG
CTAAGGTGGGAGTACCAGAAACGGCACAAATTACCAAGATTGGCTCACATGAGGTTAGCAACTGGGAAAGCTTGATTCAG
GCTGTGGAATCAGAAACCAAAGATAAGACGGCCCCGACCTTGGATGTGACTATTTCTGAAAAGGGGAGTGACAAACAAGT
TACGGTTACTCCGGAAGAAAGTCAAGGCCGTTACCTTCTAGGTGTTCAACCGGGGATTAAGTCAGATTTTGTATCTATGT
TTGTAGGTGGTTTTACAACTGCTGCTGACTCGGCCCTCCGAATTTTATCAGCTCTGAAAAATCTGATTTTCCAACCGGAT
TTGAACAAGCTAGGTGGACCTGTTGCCATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAGAATGTCTTGTA
CTTCTTGGCAATTATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCCTGGATGGTGGTAAGATTGTGC
TCAATATCCTGGAAGCCATTCGCCGCAAACCATTAAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACCTGGAATGACATTATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

64.048

100

0.642

  eeP Streptococcus thermophilus LMG 18311

63.81

100

0.64


Multiple sequence alignment